clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020M02 | Sequence | 509 | 011351 (9) | ref|XP_009606560.1| | 8e-13 | PREDICTED: uncharacterized protein in LEU2 3'region [Nicotiana tomentosiformis] | 716 | 011351 (9) | ref|XP_006343032.1| | 3e-33 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] |
JMSF031M15 | Sequence | 663 | 011351 (9) | ref|XP_009795139.1| | 126 | PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris] | 690 | 011351 (9) | ref|XP_006343032.1| | 3e-12 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] |
JMSF031N21 | Sequence | 639 | 011351 (9) | ref|XP_009795139.1| | 140 | PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris] | 620 | 011351 (9) | ref|XP_006343032.1| | 6e-13 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] |
JMSF032M15 | Sequence | 624 | 011351 (9) | ref|XP_006343032.1| | 4e-15 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] | |||||
JMSF038L03 | Sequence | 663 | 011351 (9) | ref|XP_009795139.1| | 126 | PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris] | 855 | 011351 (9) | ref|XP_006343032.1| | 8e-26 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011351============================================ 861 3 ------------------------------------------------------------------------->JMSF031N21 <-----------------------------------------------------------------------rJMSF031N21 9 ---------------------------------------------------------------------------->JMSF031M15 <-------------------------------------------------------------------------------rJMSF031M15 9 ---------------------------------------------------------------------------->JMSF038L03 <--------------------------------------------------------------------------------------------------rJMSF038L03 96 ---------------------------------------------------------->JMFF020M02 <---------------------------------------------------------------------------rJMFF020M02
The following clones don't have the opposite end in this pair.
<----------------------------------------------------------------------rJMSF032M15-