Contig 011351:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M02Sequence509011351 (9)ref|XP_009606560.1|8e-13PREDICTED: uncharacterized protein in LEU2 3'region [Nicotiana tomentosiformis]716011351 (9)ref|XP_006343032.1|3e-33PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum]
JMSF031M15Sequence663011351 (9)ref|XP_009795139.1|126PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris]690011351 (9)ref|XP_006343032.1|3e-12PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum]
JMSF031N21Sequence639011351 (9)ref|XP_009795139.1|140PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris]620011351 (9)ref|XP_006343032.1|6e-13PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum]
JMSF032M15Sequence624011351 (9)ref|XP_006343032.1|4e-15PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum]
JMSF038L03Sequence663011351 (9)ref|XP_009795139.1|126PREDICTED: uncharacterized protein LOC104241880 [Nicotiana sylvestris]855011351 (9)ref|XP_006343032.1|8e-26PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031N21- GTGCATGTTTCATAGTAT
JMSF031M15- GTGCATGTTTCATAGTAT
JMFF020M02- GTGCATGTTTCATAGTAT
JMSF038L03- GTGCATGTTTCATAGTAT
rJMSF038L03+ GACGTGCATGTTTCATAGTAT
                      ____________________________________________________________
consensus GACGTGCATGTTTCATAGTAT
 
. : . : . : . : . : . :
JMSF031N21- TTGATAAAGGAAGCTTCTTGATCAGGATCGGAGGACCATACCCGGGCGATTATTATAAGG
JMSF031M15- TTGATAAAGGAAGCTTCTTGATCAGGATCGGAGGACCATACCCGGGCGATTATTATAAGG
JMFF020M02- TTGATAAAGGAAGCTTCTTGATCAGGATCGGAGGACCATACCCGGGCGATTATTATAAGG
JMSF038L03- TTGATAAAGGAAGCTTCTTGATCAGGATCGGAGGACCATACCCGGGCGATTATTATAAGG
rJMSF038L03+ TTGATAAAGGAAGCTTTTTGATCAGGATCGGAGGACCATACCCGGGCGANTATTATAAGG
                      ____________________________________________________________
consensus TTGATAAAGGAAGCTTCTTGATCAGGATCGGAGGACCATACCCGGGCGATTATTATAAGG
 
. : . : . : . : . : . :
JMSF031N21- TGGTTGTTACAAAGGTTTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
JMSF031M15- TGGTTGTTACAAAGGTTTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
JMFF020M02- TGGTTGTTACAAAGGTTTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
JMSF038L03- TGGTTGTTACAAAGGTTTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
rJMFF020M02+ TTTCGCAGTGGGATCAAATCCCAGAAAGCT
rJMSF038L03+ TGGTTGTTACAAAGGTNTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
                      ____________________________________________________________
consensus TGGTTGTTACAAAGGTTTCTTCTTAATTAATTTCGCAGTTGGATCAAATCCCAGAAAGCT
 
. : . : . : . : . : . :
JMSF031N21- CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTCGTTTCTGTA
JMSF031M15- CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTCGTTTCTGTA
JMFF020M02- CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTGGTTTCTGTA
JMSF038L03- CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTGGTTTCTGTA
rJMFF020M02+ CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTGGTTTCTGTA
rJMSF032M15+ TGATTCAAGATCANTCGTTTNTGTA
rJMSF038L03+ CAGATCNTCTGCAATGGGAGANGGCANGACTCAGTTGATTCAAGATCAGTGGTTTCTGTA
rJMSF031M15+ GACTCAGTTGATTCAAGATCANTCGTTTCTGTA
                      ____________________________________________________________
consensus CAGATCATCTGCAATGGGAGAAGGCAAGACTCAGTTGATTCAAGATCAGTGGTTTCTGTA
 
. : . : . : . : . : . :
JMSF031N21- TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
JMSF031M15- TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
JMFF020M02- TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
JMSF038L03- TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
rJMFF020M02+ TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
rJMSF032M15+ TGGGAATAATAATAATAATAATGGTNTCAAGAATCACCANGAAGAAGAAGATGATGCATC
rJMSF038L03+ TGGGAATAATAATAATAATAATGGTTTCANGAATCACCANGAAGAAGAAGATGATGCATC
rJMSF031M15+ TGGGAATAATAATAATAATAATGGTTTCANGANTCACCANGAAGAAGAAGATGATGCATC
rJMSF031N21+ GAAGAAGAAGANGANGCATC
                      ____________________________________________________________
consensus TGGGAATAATAATAATAATAATGGTTTCAAGAATCACCAGGAAGAAGAAGATGATGCATC
 
. : . : . : . : . : . :
JMSF031N21- ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
JMSF031M15- ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
JMFF020M02- ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
JMSF038L03- ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
rJMFF020M02+ ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
rJMSF032M15+ ATCATCATCCACTTCATCATCANTCATAGGAGAGAGTTCCTCATCATTATCATCATCATC
rJMSF038L03+ ATCATCATCCACTTCATCATCANTCATAGGAGAGANTTCCTCATCATTATCATCATCATC
rJMSF031M15+ ATCATCATCCACTTCATCATCANTCATAGGAGAGAGNTCCTCATCATTATCATCATCATC
rJMSF031N21+ ATCATCATCCACTTCATCATCANTCATAGGAGAGANTTCCTCATCATTATCATCATCATC
                      ____________________________________________________________
consensus ATCATCATCCACTTCATCATCATTCATAGGAGAGAATTCCTCATCATTATCATCATCATC
 
. : . : . : . : . : . :
JMSF031N21- ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
JMSF031M15- ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
JMFF020M02- ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
JMSF038L03- ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
rJMFF020M02+ ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
rJMSF032M15+ ATCATCATCAACAATATGTTCTCTGGNCACCACAGAGGATGCATNTTTTTCATCTTCACC
rJMSF038L03+ ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATNTTNTTCATCTTCACC
rJMSF031M15+ ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATNTTNTTCATCTTCACC
rJMSF031N21+ ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATNTTCTTCATCTTCACC
                      ____________________________________________________________
consensus ATCATCATCAACAATATGTTCTCTGGACACCACAGATGATGCATCTTCTTCATCTTCACC
 
. : . : . : . : . : . :
JMSF031N21- TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
JMSF031M15- TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
JMFF020M02- TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
JMSF038L03- TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
rJMFF020M02+ TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
rJMSF032M15+ TCCNTCCNTCAANGGATCCNTGTATGACCTCTCATCTCTCANGTCCCANTTACCCATCAA
rJMSF038L03+ TCCNTCCTTCAATGGATCCNTGTATGACCTCTCATCTCTCATGTCCCANTTACCCATCAA
rJMSF031M15+ TCCNTCCNTCAANGGATCCNTGTATGACCTCTCNTCTCTCATGTCCCANTTACCCATCAA
rJMSF031N21+ TCCNTCCNTCAATGGATCCNTGTATGACCTCTCATCTCTCATGTCCCANTTACCCATCAA
                      ____________________________________________________________
consensus TCCTTCCTTCAATGGATCCTTGTATGACCTCTCATCTCTCATGTCCCAATTACCCATCAA
 
. : . : . : . : . : . :
JMSF031N21- GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
JMSF031M15- GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
JMFF020M02- GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
JMSF038L03- GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
rJMFF020M02+ GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
rJMSF032M15+ GAGGGGGNTGTNTAAATTCTATAATGGGAAATCNGANTCTTTCACATCTTTGTCAAGGGT
rJMSF038L03+ GAGGGGGCTGTNTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
rJMSF031M15+ GAGGGGGCNGTNTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCANGGGT
rJMSF031N21+ GAGGGGGCNGTNTAAATTCTATAATGGGAAATCNGAATCTTTCACATCTTTGTCANGGGT
                      ____________________________________________________________
consensus GAGGGGGCTGTCTAAATTCTATAATGGGAAATCAGAATCTTTCACATCTTTGTCAAGGGT
 
. : . : . : . : . : . :
JMSF031N21- GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCATTCAAGAGAAAAATGAAGGCTTG
JMSF031M15- GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCATTCAAGAGAAAAATGAAGGCTTG
JMFF020M02- GAGCAGCAT
JMSF038L03- GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCATTCAAGAGAAAAATGAAGGCTTG
rJMFF020M02+ GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCATTCAAGAGAAAAATGAAGGCTTG
rJMSF032M15+ GAGCAGCATAGAAGAGCNNGCAAAGAAAGANACACCNNTCANGAGAAAAATGAAGGCTNG
rJMSF038L03+ GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCNNTCANGAGAAAAATGAAGGCTTG
rJMSF031M15+ GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCNNTCANGAGAAAAATGAAGGCTNG
rJMSF031N21+ GAGCAGCATAGAAGAGCTNGCAAAGAAAGAAACACCNNTCANGAGAAAAATGAAGGCTNG
                      ____________________________________________________________
consensus GAGCAGCATAGAAGAGCTTGCAAAGAAAGAAACACCATTCAAGAGAAAAATGAAGGCTTG
 
. : . : . : . : . : . :
JMSF031N21- CAAGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCCTAAGCCAATTAT
JMSF031M15- CAAGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCCTAAGCCAATTAT
JMSF038L03- CAAGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCCTAAGCCAATTAT
rJMFF020M02+ CAAGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCCTAAGCCAATTAT
rJMSF032M15+ CANGAGCTATGGGGNTGGGTNGGATGCCTACAAATCATACACTTCTCTTAAGCCANTTAT
rJMSF038L03+ CANGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCTTAAGCCANTTAT
rJMSF031M15+ CANGAGCTATGGGGNTGGGTNGGATGCCTACAAATCATACACTTCTCTTAAGCCANTTAT
rJMSF031N21+ CANGAGCTATGGGGNTGGGTNGGATGCCTACAAATCATACACTTCTCTTAAGCCANTTAT
                      ____________________________________________________________
consensus CAAGAGCTATGGGGCTGGGTTGGATGCCTACAAATCATACACTTCTCCTAAGCCAATTAT
 
. : . : . : . : . : . :
JMSF031N21- CACAAAGAAACCCTCATC
JMSF031M15- CACAAAGAAACCCTCATCCAAGATCTCATTTTCATCTTCTCA
JMSF038L03- CACAAAGAAACCCTCATCCAAGATCTCATTTTCATCTTCTCA
rJMFF020M02+ CACAAAGAAACCCTCATCCAAGATCTCATTTTCATCTTCTCAAACTAGAAGAGGGAGCTT
rJMSF032M15+ CNCANAGAAACCCTCNTCCANGATCTCNTTTTCNTCTTCTCANACTAGAAGAGGGAGNTT
rJMSF038L03+ CACAAAGAAACCCTCNTCCANGATCTCNTTTTCATCTTCTCNAACTAGAAGAGGGAGCTT
rJMSF031M15+ CNCAAAGAAACCCTCNTCCANGATCTCNTTTTCATCTTCTCAAACTAGAAGAGGGAGCTT
rJMSF031N21+ CNCAAAGAAACCCTCNTCCANGATCTCNTTTTCATCTTCTCAAACTAGAAGAGGGAGCTT
                      ____________________________________________________________
consensus CACAAAGAAACCCTCATCCAAGATCTCATTTTCATCTTCTCAAACTAGAAGAGGGAGCTT
 
. : . : . : . : . : . :
rJMFF020M02+ CACCAGCAGGAGCACTAGACCCCCTCTCATTCCTGTGCAGGAGAACCACCTAGGATGCTA
rJMSF032M15+ CNCCNGCANGAGCNCTAGACCCCCTCCCANTCNTGTGCAGGAGANCCNCCTAGGANGCTA
rJMSF038L03+ CACCAGCAGGAGCNCTAGACCCCCTCTCNNTCCTGTGCAGGAGANCCACCTAGGATGCTA
rJMSF031M15+ CACCNGCNGGAGCNCTAGACCCCCTCCCANTCCTGTGCNGGAGANCCACCTAGGATGCTA
rJMSF031N21+ CNCCNGCAGGAGCNCTAGACCCCCTCCCANTCCTGTGCNGGAGANCCACCTAGGATGCTA
                      ____________________________________________________________
consensus CACCAGCAGGAGCACTAGACCCCCTCCCATTCCTGTGCAGGAGAACCACCTAGGATGCTA
 
. : . : . : . : . : . :
rJMFF020M02+ AACTTTGTTGTTCTTCATAGAGAGAGA
rJMSF032M15+ AACTNTGTTGTTCTTCATAGAGAGAGAAACANGGGTNTTATTCATTTTCT
rJMSF038L03+ AACTTTGCTGTTCTTCATAGAGAGAGAAACANGGGTCTTATTAATTTTCTTACATATAGT
rJMSF031M15+ AACTTTGTTGTTNTTCATAGAGAGAGAAACANGGGTCTTATTAATTTTCTTACANATAGT
rJMSF031N21+ AACTTTGTTGTTNTTCATAGAGAGAGAAACANGGGTNTTATTAATTTTCTTACANATAGT
                      ____________________________________________________________
consensus AACTTTGTTGTTCTTCATAGAGAGAGAAACANGGGTCTTATTAATTTTCTTACATATAGT
 
. : . : . : . : . : . :
rJMSF038L03+ GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTTATAGTTATTGAATTT
rJMSF031M15+ GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTTATAGTTATTGAATTT
rJMSF031N21+ GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTTATAGTTATTGAATTTTGTTAC
                      ____________________________________________________________
consensus GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTTATAGTTATTGAATTTTGTTAC