clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN006K14 | Sequence | 517 | 004203 (12) | ref|XP_009785004.1| | 63.9 | PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris] | |||||
JMFN009H06 | Sequence | 488 | 004203 (12) | ref|XP_009785004.1| | 64.3 | PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris] | |||||
JMSF004B02 | Sequence | 277 | 004203 (12) | ref|XP_009619637.1| | 4e-05 | PREDICTED: mechanosensitive ion channel protein 10-like, partial [Nicotiana tom | 102 | 004203 (12) | |||
JMSF009J01 | Sequence | 383 | 004203 (12) | emb|CDP13453.1| | 5e-10 | unnamed protein product [Coffea canephora] | 497 | 004203 (12) | emb|CDP13453.1| | 5e-14 | unnamed protein product [Coffea canephora] |
JMSF010P19 | Sequence | 254 | 004203 (12) | ref|XP_009619637.1| | 5e-08 | PREDICTED: mechanosensitive ion channel protein 10-like, partial [Nicotiana tom | 455 | 004203 (12) | ref|XP_009785004.1| | 63.9 | PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris] |
JMSF023G16 | Sequence | 512 | 004203 (12) | ref|XP_009785004.1| | 63.9 | PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris] | 456 | 004203 (12) | ref|XP_009785004.1| | 63.9 | PREDICTED: uncharacterized protein LOC104233313 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004203============================================ 581 84 ----------------------------------------------------------------->JMSF009J01 <-------------------------------------------------------------------------------------rJMSF009J01 125 ------------------------------------------------------------------------------------->JMSF023G16 <-----------------------------------------------------------------------------rJMSF023G16 126 ------------------------------------------->JMSF010P19 <-----------------------------------------------------------------------------rJMSF010P19 221 ----------------------------------------------->JMSF004B02 <-----------------rJMSF004B02
The following clones don't have the opposite end in this pair.
<---------------------------------------------------rJMSF004B04* --------------------------->JMSF010J01* ----------------------------------------------------------------------------------->JMFN009H06- ---------------------------------------------------------------------------------------->JMFN006K14-