clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF007B18 | Sequence | 298 | 001280 (6) | ref|XP_006359337.1| | 5e-19 | PREDICTED: protein IN2-1 homolog B-like isoform X1 [Solanum tuberosum] | 783 | 001280 (6) | ref|XP_009769896.1| | 2e-99 | PREDICTED: protein IN2-1 homolog B-like isoform X2 [Nicotiana sylvestris] |
JMSF015N21 | Sequence | 485 | 001280 (6) | ref|XP_006359337.1| | 1e-61 | PREDICTED: protein IN2-1 homolog B-like isoform X1 [Solanum tuberosum] | 775 | 001280 (6) | ref|XP_009769896.1| | 2e-117 | PREDICTED: protein IN2-1 homolog B-like isoform X2 [Nicotiana sylvestris] |
JMSF036A09 | Sequence | 676 | 001280 (6) | ref|XP_009769895.1| | 4e-78 | PREDICTED: protein IN2-1 homolog B-like isoform X1 [Nicotiana sylvestris] | 787 | 001280 (6) | ref|XP_009769895.1| | 1e-98 | PREDICTED: protein IN2-1 homolog B-like isoform X1 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001280============================================1076 39 ----------------------->JMSF007B18 <-----------------------------------------------------------------------rJMSF007B18 75 -------------------------------------------->JMSF015N21 <-----------------------------------------------------------------------rJMSF015N21 142 -------------------------------------------------------------->JMSF036A09 <------------------------------------------------------------------------rJMSF036A09
The following clones don't have the opposite end in this pair.