clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009N09 | Sequence | 550 | 009717 (8) | gb|ABB77430.1| | 4e-63 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 706 | 009717 (8) | ref|XP_004232171.1| | 3e-96 | PREDICTED: F-box protein At5g39250 [Solanum lycopersicum] |
JMFF029M04 | Sequence | 341 | 009717 (8) | gb|ABB77430.1| | 5e-34 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 622 | 009717 (8) | ref|NP_001275626.1| | 2e-61 | uncharacterized protein LOC102589149 [Solanum tuberosum] ref|XP_006338378.1| PRE |
JMFF040E24 | Sequence | 334 | 009717 (8) | gb|ABB77430.1| | 7e-35 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 683 | 009717 (8) | ref|XP_004232171.1| | 2e-94 | PREDICTED: F-box protein At5g39250 [Solanum lycopersicum] |
JMSF043K01 | Sequence | 822 | 009717 (8) | ref|XP_009757451.1| | 1e-138 | PREDICTED: F-box protein At5g39250 [Nicotiana sylvestris] | 799 | 009717 (8) | ref|XP_009757451.1| | 2e-115 | PREDICTED: F-box protein At5g39250 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009717============================================1205 24 --------------------------------------------->JMFF009N09 <----------------------------------------------------------rJMFF009N09 70 -------------------------->JMFF029M04 <---------------------------------------------------rJMFF029M04 93 ------------------------------------------------------------------->JMSF043K01 <-----------------------------------------------------------------rJMSF043K01 114 -------------------------->JMFF040E24 <--------------------------------------------------------rJMFF040E24
The following clones don't have the opposite end in this pair.