| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009N09 | Sequence | 550 | 009717 (8) | gb|ABB77430.1| | 4e-63 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 706 | 009717 (8) | ref|XP_004232171.1| | 3e-96 | PREDICTED: F-box protein At5g39250 [Solanum lycopersicum] |
| JMFF029M04 | Sequence | 341 | 009717 (8) | gb|ABB77430.1| | 5e-34 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 622 | 009717 (8) | ref|NP_001275626.1| | 2e-61 | uncharacterized protein LOC102589149 [Solanum tuberosum] ref|XP_006338378.1| PRE |
| JMFF040E24 | Sequence | 334 | 009717 (8) | gb|ABB77430.1| | 7e-35 | non-S-locus F-box protein 23, partial [Petunia integrifolia subsp. inflata] | 683 | 009717 (8) | ref|XP_004232171.1| | 2e-94 | PREDICTED: F-box protein At5g39250 [Solanum lycopersicum] |
| JMSF043K01 | Sequence | 822 | 009717 (8) | ref|XP_009757451.1| | 1e-138 | PREDICTED: F-box protein At5g39250 [Nicotiana sylvestris] | 799 | 009717 (8) | ref|XP_009757451.1| | 2e-115 | PREDICTED: F-box protein At5g39250 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF009N09- GGCAC
____________________________________________________________
consensus GGCAC
. : . : . : . : . : . :
JMFF009N09- ATGCGATTACTCTCTCTCTCTTGATCGAAGGCGAAAGAGCGAAAGGCATCTCTGTATCTC
____________________________________________________________
consensus ATGCGATTACTCTCTCTCTCTTGATCGAAGGCGAAAGAGCGAAAGGCATCTCTGTATCTC
. : . : . : . : . : . :
JMFF040E24- GGTTCTCAACGTCTCTCTGAGCATTAAGTAGAGGAAAAGACTACTANTTGATGGA
JMFF029M04- GGTTCTCAACGTCTCTCTGAGCATTAAGTAGAGGAAAAGACTACTAGTTGATGGA
JMFF009N09- ATTCTGGTTCTCAACGTCTCTCTGAGCATTAAGTAGAGGAAAAGACTACTAGTTGATGGA
JMSF043K01- GGTTCTCAACGTCTCTCTGAGCATTAAGTAGAGGAAAAGACTACTAGTTGATGGA
____________________________________________________________
consensus ATTCTGGTTCTCAACGTCTCTCTGAGCATTAAGTAGAGGAAAAGACTACTAGTTGATGGA
. : . : . : . : . : . :
JMFF040E24- TTCAGGAATCGTAATTCCTTANTGAGGTGCTTAAGCTGAGTGCTGAGTTTGAATTGTCAG
JMFF029M04- TTCAGGAATCGTAATTCCTTAATGAGGTGCTTAAGCTGAGTGCTGAGTTTGAATTGTCAG
JMFF009N09- TTCAGGAATCGTAATTCCTTAATGAGGTGCTTAAGCTGAGTGCTGAGTTTGAATTGTCAG
JMSF043K01- TTCAGGAATCGTAATTCCTTAATGAGGTGCTTAAGCTGAGTGCTGAGTTTGAATTGTCAG
____________________________________________________________
consensus TTCAGGAATCGTAATTCCTTAATGAGGTGCTTAAGCTGAGTGCTGAGTTTGAATTGTCAG
. : . : . : . : . : . :
JMFF040E24- TTTTGTTGCTGTACCAAAAATGTCATGTGAAGAAATTTTGAAGGCTGTCTTCCCATTCTT
JMFF029M04- TTTTGTTGCTGTACCAAAAATGTCATGTGAAGAAATTTTGAAGGCTGTCTTCCCATTCTT
JMFF009N09- TTTTGTTGCTGTACCAAAAATGTCATGTGAAGAAATTTTGAAGGCTGTCTTCCCATTCTT
JMSF043K01- TTTTGTTGCTGTACCAAAAATGTCATGTGAAGAAATTTTGAAGGCTGTCTTCCCATTCTT
____________________________________________________________
consensus TTTTGTTGCTGTACCAAAAATGTCATGTGAAGAAATTTTGAAGGCTGTCTTCCCATTCTT
. : . : . : . : . : . :
JMFF040E24- GGAGGGCACTGACCTTGCTACATGTATGTTAGTTTGCAAACAGTGGTGCGAGATTGCACA
JMFF029M04- GGAGGGCACTGACCTTGCTACATGTATGTTAGTTTGCAAACAGTGGTGCGAGATTGCACN
JMFF009N09- GGAGGGCACTGACCTTGCTACATGTATGTTAGTTTGCAAACAGTGGTGCGAGATTGCACA
JMSF043K01- GGAGGGCACTGACCTTGCTACATGTATGTTAGTTTGCAAACAGTGGTGCGAGATTGCACA
____________________________________________________________
consensus GGAGGGCACTGACCTTGCTACATGTATGTTAGTTTGCAAACAGTGGTGCGAGATTGCACA
. : . : . : . : . : . :
JMFF040E24- AGATGATTACTTCTGGAAGTGTCTATGTGCAAAGAAGTGGCCATCTATATGCAAACGTCC
JMFF029M04- AGATGATTACTTCTGGAAGTGTCTATGTGCAAANAAGTGGCCATCTATATGCAAACGTCC
JMFF009N09- AGATGATTACTTCTGGAAGTGTCTATGTGCAAAGAAGTGGCCATCTATATGCAAACGTCC
JMSF043K01- AGATGATTACTTCTGGAAGTGTCTATGTGCAAAGAAGTGGCCATCTATATGCAAACGTCC
____________________________________________________________
consensus AGATGATTACTTCTGGAAGTGTCTATGTGCAAAGAAGTGGCCATCTATATGCAAACGTCC
. : . : . : . : . : . :
JMFF040E24- ATCCCCACCCACTGTAACCTACTACAAATTATTCC
JMFF029M04- ATCCCCACCCACTGTAACCTACTACAAATTATTCC
JMFF009N09- ATCCCCACCCACTGTAACCTACTACAAATTATTCCAGACATTTTACAAGCACAAGAATCG
JMSF043K01- ATCCCCACCCACTGTAACCTACTACAAATTATTCCAGACATTTTACAAGCACAAGAATCG
rJMSF043K01+ TACTACAAATTATTCCAGACATTTTACAAGCACCAGAATCG
____________________________________________________________
consensus ATCCCCACCCACTGTAACCTACTACAAATTATTCCAGACATTTTACAAGCACAAGAATCG
. : . : . : . : . : . :
JMFF009N09- CAGAATCATTCTCCCTCCTAAACTGTCTTTCAACGAATTGGAATTCTACATTGACATTTG
JMSF043K01- CAGAATCATTCTCCCTCCTAAACTGTCTTTCAACGAATTGGAATTCTACATTGACATTTG
rJMFF040E24+ ACATTTG
rJMFF009N09+ TGACATTTG
rJMSF043K01+ CAGAATCATTCTCCCTCCTAAACTGTCTTTCAACGAATTGGAATTCTACATTGACATTTG
____________________________________________________________
consensus CAGAATCATTCTCCCTCCTAAACTGTCTTTCAACGAATTGGAATTCTACATTGACATTTG
. : . : . : . : . : . :
JMFF009N09- GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
JMSF043K01- GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
rJMFF040E24+ GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
rJMFF009N09+ GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
rJMSF043K01+ GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
____________________________________________________________
consensus GGCTGACAACAAGATAATATTCTCAGAAGTGGTGCCAGGACCTGTTCTCCAAAAGGGGAC
. : . : . : . : . : . :
JMFF009N09- ATGGA
JMSF043K01- ATGGATTCCGCCACCCGGTATCTGCGATGTGCTAAGGTTTCATCTGGAAGGGCCAGAATA
rJMFF040E24+ ATGGATTCCGCCACCCGGTATCTGCGATGTGCTAAGGTNTCATCTGGAAGGGCCAGAATA
rJMFF009N09+ ATGGATTCCGCCACCCGGTATCTGCGATGTGCTAAGGTTTCATCTGGAAGGGCCAGAATA
rJMSF043K01+ ATGGATTCCGCCACCCGGTATCTGCGATGTGCTAAGGTTTCATCTGGAAGGGCCAGAATA
rJMFF029M04+ TTCATCTGGAAGGGCCAGAATA
____________________________________________________________
consensus ATGGATTCCGCCACCCGGTATCTGCGATGTGCTAAGGTTTCATCTGGAAGGGCCAGAATA
. : . : . : . : . : . :
JMSF043K01- CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTTTGAGCCAGACAGTCAGTGT
rJMFF040E24+ CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTTTGAGCCAGACAGTCAGTGT
rJMFF009N09+ CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTTTGAGCCAGACAGTCAGTGT
rJMSF043K01+ CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTTTGAGCCAGACAGTCAGTGT
rJMFF029M04+ CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTGTGAGCCAGACAGTCAGTGT
____________________________________________________________
consensus CAAGATGACTCTTCCTGTAGAACCAAGGTTTACAGTCCCTTTGAGCCAGACAGTCAGTGT
. : . : . : . : . : . :
JMSF043K01- TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
rJMFF040E24+ TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
rJMFF009N09+ TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
rJMSF043K01+ TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
rJMFF029M04+ TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
____________________________________________________________
consensus TTCTGTGCTTGTGGGGCGGAAAGATAAGAACAAAGTTGCTTGTATCATTAACAAATCCAT
. : . : . : . : . : . :
JMSF043K01- TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
rJMFF040E24+ TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
rJMFF009N09+ TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
rJMSF043K01+ TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
rJMFF029M04+ TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
____________________________________________________________
consensus TTTCGATTACGTAGACCGAACAGCATACCGGGCTCTGGCATACGACTATCTCGAGTTCTC
. : . : . : . : . : . :
JMSF043K01- CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
rJMFF040E24+ CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
rJMFF009N09+ CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
rJMSF043K01+ CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
rJMFF029M04+ CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
____________________________________________________________
consensus CTCTCCAGTTTGCTTATTCGTGTCTGGCATTCGGGCATGGATATCCTTGCTCTTCATGGA
. : . : . : . : . : . :
JMSF043K01- CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGG
rJMFF040E24+ CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGGTATTGAAATGGATTT
rJMFF009N09+ CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGGTATTGAAATGGATTT
rJMSF043K01+ CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGGTATTGAAATGGATTT
rJMFF029M04+ CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGGTATTGAAATGGATTT
____________________________________________________________
consensus CCATGGCACCGAGGGGGTTAGCGATGTGGTTATTGATGTTTTTGGTATTGAAATGGATTT
. : . : . : . : . : . :
rJMFF040E24+ CTGTGATGCTGCCAATTCAGAAGAAGAGGTTCTGTGGCTACTTGACATGCTGGATTGGAA
rJMFF009N09+ CTGTGATGCTGCCAATTCAGAAGAAGAGGTTCTGTGGCTACTTGACATGCTGGATTGGAA
rJMSF043K01+ CTGTGATGCTGCCAATTCAGAAGAAGAGGTTCTGTGGCTACTTGACATGCTGGATTGGAA
rJMFF029M04+ CTGTGATGCTGCCAATTCAGAAGAAGAGGTTCTGTGGCTACTTGACATGCTGGATTGGAA
____________________________________________________________
consensus CTGTGATGCTGCCAATTCAGAAGAAGAGGTTCTGTGGCTACTTGACATGCTGGATTGGAA
. : . : . : . : . : . :
rJMFF040E24+ GTGATGTTCAATGGGTTTCTGGTTTCTTGAAGGACTTCGTTTTGTTCCTTTGTTACAATC
rJMFF009N09+ GTGATGTTCAATGGGTTTCTGGTTTCTTGAAGGACTTCGTTTTGTTCCTTTGTTACAATC
rJMSF043K01+ GTGATGTTCAATGGGTTTCTGGTTTCTTGAAGGACTTCGTTTTGTTCCTTTGTTACAATC
rJMFF029M04+ GTGATGTTCAATGGGTTTCTGGTTTCTTGAAGGACTTCGTTTTGTTCCTTTGTTACAATC
____________________________________________________________
consensus GTGATGTTCAATGGGTTTCTGGTTTCTTGAAGGACTTCGTTTTGTTCCTTTGTTACAATC
. : . : . : . : . : . :
rJMFF040E24+ TAAATGCCTGTACATATTTTGTGCTCTTCTTGATTGATGTTATTATGTGGGCAATAACTG
rJMFF009N09+ TAAATGCCTGTACATATTTTGTGCTCTTCTTGATTGATGTTATTATGTGGGCAATAACTG
rJMSF043K01+ TAAATGCCTGTACATATTTTGTGCTCTTCTTGATTGATGTTATTATGTGGGCAATAACTG
rJMFF029M04+ TAAATGCCTGTACATATTTTGTGCTCTTCTTGATTGATGTTATTATGTGGGCAATAACTG
____________________________________________________________
consensus TAAATGCCTGTACATATTTTGTGCTCTTCTTGATTGATGTTATTATGTGGGCAATAACTG
. : . : . : . : . : . :
rJMFF040E24+ TGTACAAGAAGTTAAAAGACTTTTTCTCTATGTTTTTAGTTCATGCACAGTTCTAGTGGT
rJMFF009N09+ TGTACAAGAAGTTAAAAGACTTTTTCTCTATGTTTTTAGTTCATGCACAGTTCTAGTGGT
rJMSF043K01+ TGTACAAGAAGTTAAAAGACTTTTTCTCTATGTTTTTAGTTCATGCACAGTTCTAGTGGT
rJMFF029M04+ TGTACAAGAAGTTAAAAGACTTTTTCTCTATGTTTTTAGTTCATGCACAGTTCTAGTGGT
____________________________________________________________
consensus TGTACAAGAAGTTAAAAGACTTTTTCTCTATGTTTTTAGTTCATGCACAGTTCTAGTGGT
. : . : . : . : . : . :
rJMFF040E24+ TCTAAAGAAACGCAAA
rJMFF009N09+ TCTAAAGAAACGCAAAATGTATGCTTGTCAGACCAAT
rJMSF043K01+ TCTAAAGAAACGCAAAATGTATGCTTGTCAGACCAAT
rJMFF029M04+ TCTAAAGAAACGCAAAATGTATGCTTGTCAGACCAATTCTTTATCAATGATGCAATAAAA
____________________________________________________________
consensus TCTAAAGAAACGCAAAATGTATGCTTGTCAGACCAATTCTTTATCAATGATGCAATAAAA