clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF014I06 | Sequence | 533 | 007251 (10) | gb|ACF21004.1| | 2e-70 | 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza] | 788 | 007251 (10) | ref|XP_009615219.1| | 1e-97 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic |
JMSF024C07 | Sequence | 694 | 007251 (10) | ref|XP_009615219.1| | 3e-98 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic | 714 | 007251 (10) | ref|XP_009615219.1| | 4e-98 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic |
JMSF033A02 | Sequence | 695 | 007251 (10) | ref|XP_009615219.1| | 4e-98 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic | 654 | 007251 (10) | ref|XP_009793959.1| | 2e-89 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic |
JMSF041C17 | Sequence | 764 | 007251 (10) | ref|XP_009615219.1| | 9e-95 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic | 552 | 007251 (10) | ref|XP_009793959.1| | 7e-90 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic |
JMSF051C07 | Sequence | 648 | 007251 (10) | ref|XP_009615219.1| | 3e-96 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic | 733 | 007251 (10) | ref|XP_009615219.1| | 3e-95 | PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Nic |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007251============================================ 855 1 --------------------------------------------------------------------------->JMSF051C07 <-------------------------------------------------------------------------------------rJMSF051C07 6 -------------------------------------------------------------------------------->JMSF033A02 <---------------------------------------------------------------------------rJMSF033A02 38 ------------------------------------------------------------->JMSF014I06 <-------------------------------------------------------------------------------------------rJMSF014I06 112 -------------------------------------------------------------------------------->JMSF024C07 <-----------------------------------------------------------------------------------rJMSF024C07 113 ---------------------------------------------------------------------------------------->JMSF041C17 <----------------------------------------------------------------rJMSF041C17
The following clones don't have the opposite end in this pair.