clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF041F09 | Sequence | 657 | 008303 (8) | emb|CDP01762.1| | 1e-99 | unnamed protein product [Coffea canephora] | 637 | 008303 (8) | emb|CDP01762.1| | 5e-105 | unnamed protein product [Coffea canephora] |
JMSF001G23 | Sequence | 190 | 008303 (8) | 778 | 008303 (8) | emb|CDP01762.1| | 3e-143 | unnamed protein product [Coffea canephora] | |||
JMSF018I10 | Sequence | 546 | 008303 (8) | emb|CDP01762.1| | 6e-83 | unnamed protein product [Coffea canephora] | 768 | 008303 (8) | ref|XP_002532478.1| | 9e-104 | translation initiation factor, putative [Ricinus communis] gb|EEF29902.1| transl |
JMSF038G22 | Sequence | 667 | 008303 (8) | emb|CDP01762.1| | 2e-114 | unnamed protein product [Coffea canephora] | 816 | 008303 (8) | emb|CDP01762.1| | 3e-159 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008303============================================1068 4 ------------------------------------------------------------->JMFF041F09 <-----------------------------------------------------------rJMFF041F09 33 -------------------------------------------------->JMSF018I10 <----------------------------------------------------------------------rJMSF018I10 36 --------------->JMSF001G23 <------------------------------------------------------------------------rJMSF001G23 36 ------------------------------------------------------------->JMSF038G22 <---------------------------------------------------------------------------rJMSF038G22
The following clones don't have the opposite end in this pair.