clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP003C07 | Sequence | 609 | 004432 (15) | ||||||||
JMCP004A02 | Sequence | 570 | 004432 (15) | ||||||||
JMCP004B09 | Sequence | 562 | 004432 (15) | ||||||||
JMCP004F07 | Sequence | 563 | 004432 (15) | ||||||||
JMCP004F09 | Sequence | 608 | 004432 (15) | ||||||||
JMCP004H12 | Sequence | 570 | 004432 (15) | ||||||||
JMCP005A11 | Sequence | 560 | 004432 (15) | ||||||||
JMCP005F05 | Sequence | 610 | 004432 (15) | ||||||||
JMCP009A01 | Sequence | 605 | 004432 (15) | ||||||||
JMCP009A09 | Sequence | 568 | 004432 (15) | ||||||||
JMCP017F11 | Sequence | 562 | 004432 (15) | ||||||||
JMCP019A02 | Sequence | 561 | 004432 (15) | ||||||||
JMCP019D01 | Sequence | 408 | 004432 (15) | ||||||||
JMCP020D07 | Sequence | 275 | 004432 (15) | gb|KJB18237.1| | 4e-04 | hypothetical protein B456_003G041500 [Gossypium raimondii] | |||||
JMFS049B06 | Sequence | 610 | 004432 (15) | ref|XP_011031071.1| | 5e-10 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like isoform X2 [Populus euph |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004432============================================ 781
The following clones don't have the opposite end in this pair.
<----------------------------------rJMCP020D07- <----------------------------------------------------------------------------rJMCP009A01- ---------------------------------------------------------------------->JMFS049B06- <------------------------------------------------------------------------JMCP004H12- <---------------------------------------------------rJMCP019D01- <-----------------------------------------------------------------------rJMCP004F07- <------------------------------------------------------------------------rJMCP009A09- <-----------------------------------------------------------------------------JMCP003C07- <-----------------------------------------------------------------------rJMCP005A11- <-----------------------------------------------------------------------JMCP017F11- <-----------------------------------------------------------------------rJMCP004B09- <----------------------------------------------------------------rJMCP005F05- <------------------------------------------------------------------------rJMCP004A02- <-----------------------------------------------------------------------rJMCP019A02- <-----------------------------------------------------------------------------rJMCP004F09-