clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018D22 | Sequence | 179 | 002689 (12) | ref|XP_004231957.1| | 3e-25 | PREDICTED: cysteine desulfurase 1, mitochondrial [Solanum lycopersicum] | |||||
JMFF045F05 | Sequence | 644 | 002689 (12) | emb|CDP02654.1| | 1e-96 | unnamed protein product [Coffea canephora] | 378 | 002689 (12) | |||
JMSF004L09 | Sequence | 469 | 002689 (12) | emb|CDP02654.1| | 4e-58 | unnamed protein product [Coffea canephora] | 475 | 002689 (12) | gb|ACI47522.1| | 3e-52 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
JMSF011H08 | Sequence | 380 | 002689 (12) | emb|CDP02654.1| | 2e-47 | unnamed protein product [Coffea canephora] | 766 | 002689 (12) | gb|ACI47522.1| | 5e-88 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
JMSF042A16 | Sequence | 725 | 002689 (12) | emb|CDP02654.1| | 8e-121 | unnamed protein product [Coffea canephora] | 731 | 002689 (12) | gb|ACI47522.1| | 5e-95 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
JMSF052E21 | Sequence | 684 | 002689 (12) | emb|CDP02654.1| | 3e-112 | unnamed protein product [Coffea canephora] | 927 | 002689 (12) | ref|XP_004231957.1| | 3e-174 | PREDICTED: cysteine desulfurase 1, mitochondrial [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002689============================================1814 11 ----------------------------------->JMFF045F05 <--------------------rJMFF045F05 42 -------------------->JMSF011H08 <-----------------------------------------rJMSF011H08 307 --------------------------------------->JMSF042A16 <--------------------------------rJMSF042A16 317 ------------------------->JMSF004L09 <------------------rJMSF004L09 318 ------------------------------------->JMSF052E21 <----------------------------------------------rJMSF052E21
The following clones don't have the opposite end in this pair.
<--------rJMSF004L11* <---------rJMFF018D22-