| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018D22 | Sequence | 179 | 002689 (12) | ref|XP_004231957.1| | 3e-25 | PREDICTED: cysteine desulfurase 1, mitochondrial [Solanum lycopersicum] | |||||
| JMFF045F05 | Sequence | 644 | 002689 (12) | emb|CDP02654.1| | 1e-96 | unnamed protein product [Coffea canephora] | 378 | 002689 (12) | |||
| JMSF004L09 | Sequence | 469 | 002689 (12) | emb|CDP02654.1| | 4e-58 | unnamed protein product [Coffea canephora] | 475 | 002689 (12) | gb|ACI47522.1| | 3e-52 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
| JMSF004L11 | Sequence | 362 | 006369 (12) | ref|XP_006436063.1| | 6e-31 | hypothetical protein CICLE_v10032534mg [Citrus clementina] ref|XP_006486051.1| P | 166 | 002689 (12) | gb|EYU44534.1| | 4e-13 | hypothetical protein MIMGU_mgv1a0073322mg, partial [Erythranthe guttata] |
| JMSF011H08 | Sequence | 380 | 002689 (12) | emb|CDP02654.1| | 2e-47 | unnamed protein product [Coffea canephora] | 766 | 002689 (12) | gb|ACI47522.1| | 5e-88 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
| JMSF042A16 | Sequence | 725 | 002689 (12) | emb|CDP02654.1| | 8e-121 | unnamed protein product [Coffea canephora] | 731 | 002689 (12) | gb|ACI47522.1| | 5e-95 | iron-sulfer cluster scaffold protein NFS1, partial [Eucalyptus grandis] |
| JMSF052E21 | Sequence | 684 | 002689 (12) | emb|CDP02654.1| | 3e-112 | unnamed protein product [Coffea canephora] | 927 | 002689 (12) | ref|XP_004231957.1| | 3e-174 | PREDICTED: cysteine desulfurase 1, mitochondrial [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF052E21- GG
JMFF045F05- AGG
JMSF004L09- AGG
JMSF011H08- AGG
JMSF042A16- GTTGAAAGATTAGG
____________________________________________________________
consensus GTTGAAAGATTAGG
. : . : . : . : . : . :
JMSF052E21- TGCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
JMFF045F05- TTCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
JMSF004L09- TGCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
JMSF011H08- TGCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
JMSF042A16- TGCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
____________________________________________________________
consensus TGCATCCATTCCTGCACTAGACACACGTTTTCTGGGAATTAATTCACAGGGCACTGTACA
. : . : . : . : . : . :
JMSF052E21- CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
JMFF045F05- CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
JMSF004L09- CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
JMSF011H08- CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
JMSF042A16- CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
____________________________________________________________
consensus CGTCAGCGATTTTTAACTATGGCTTCCAAGATTCTAGCCACCGCGCTCCGCCGTACGGTT
. : . : . : . : . : . :
JMSF052E21- GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
JMFF045F05- GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
JMSF004L09- GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
JMSF011H08- GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
JMSF042A16- GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
____________________________________________________________
consensus GCTAAACCCTCCATATATTCTCGCCGCTTCTCCACTGCGGCGGCGGCGGCAGTAGAGCCA
. : . : . : . : . : . :
JMSF052E21- TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
JMFF045F05- TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
JMSF004L09- TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
JMSF011H08- TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
JMSF042A16- TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
____________________________________________________________
consensus TTCGAGGAGGACGCCGCCGGAATCACCATGAAAGGAGTAAGGATCGCCGGCAGGCCTCTG
. : . : . : . : . : . :
JMSF052E21- TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
JMFF045F05- TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
JMSF004L09- TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
JMSF011H08- TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
JMSF042A16- TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
____________________________________________________________
consensus TACCTGGACGTGCAAGCCACGTCCCCGGTGGACCCCAGAGTCCTGGACGCCATGCTTCCC
. : . : . : . : . : . :
JMSF052E21- TACTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
JMFF045F05- TACTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
JMSF004L09- TTCTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
JMSF011H08- TACTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
JMSF042A16- TACTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
____________________________________________________________
consensus TACTATCTCTCCCGCTTCGGCAACCCTCACTCGCGCACCCATCTCTACGGCTGGGAATCC
. : . : . : . : . : . :
JMSF052E21- GACCGGGCCGTCGAGGAGGCCCGAGCCCACGTCGCGGCCCTCATCAATGCTTCCCCCAAG
JMFF045F05- GACCGGGCCGTCGAGGAGGCCCGAGCCCACGTCGCGGCCCTCATCAATGCTTCCCCCAAG
JMSF004L09- GACCGGGCCGTCGAGGAGGCCCGAGCCCACGTCGCGGCCCTCATCAATGCTTCCCCCAAG
JMSF011H08- GACCGGGCCGTCGAGG
JMSF042A16- GACCGGGCCGTCGAGGAGGCCCGAGCCCACGTCGCGGCCCTCATCAATGCTTCCCCCAAG
____________________________________________________________
consensus GACCGGGCCGTCGAGGAGGCCCGAGCCCACGTCGCGGCCCTCATCAATGCTTCCCCCAAG
. : . : . : . : . : . :
JMSF052E21- GAGATTATTTTCACTTCGGGAGCTACCGAGTCGAATAACGTCTCCGTTAAGGGCGTCATG
JMFF045F05- GAGATTATTTTCACTTCGGGAGCTACCGAGTCGAATAACGTCTCCGTTAAGGGCGTCATG
JMSF004L09- GAGATTATTTTCACTTCGGGAGCTACCGAGTCGAATAACGTCTCC
JMSF042A16- GAGATTATTTTCACTTCGGGAGCTACCGAGTCGAATAACGTCTCCGTTAAGGGCGTCATC
____________________________________________________________
consensus GAGATTATTTTCACTTCGGGAGCTACCGAGTCGAATAACGTCTCCGTTAAGGGCGTCATG
. : . : . : . : . : . :
JMSF052E21- CACTTCTACAGGGAGAAGAAGCGCCACGTCATCACTACCCAGACGGAGCACAAGTGCGTT
JMFF045F05- CACTTCTACAGGGAGAAGAAGCGCCACGTCATCACTACCCAGACGGAGCACAAGTGCGTT
JMSF042A16- CACTTCTACAGGGAGAAGAAGCGCCACGTCATCACTACCCAGACGGAGCACAAGTGCGTT
____________________________________________________________
consensus CACTTCTACAGGGAGAAGAAGCGCCACGTCATCACTACCCAGACGGAGCACAAGTGCGTT
. : . : . : . : . : . :
JMSF052E21- CTCGATTCCTGCCGTCATCTCCAGCAAGAGGGTTTCGACGTCACTTATCTTCCGGTTGAC
JMFF045F05- CTCGATTCCTGCCGTCATCTCCAGCAAGAGGGTTTCGACGTCACTTATCTTCCGGTTGAC
JMSF042A16- CTCGATTCCTGCCGTCATCTCCAGCAAGAGGGTTTCGACGTCACTTATCTTCCGGTTGAC
____________________________________________________________
consensus CTCGATTCCTGCCGTCATCTCCAGCAAGAGGGTTTCGACGTCACTTATCTTCCGGTTGAC
. : . : . : . : . : . :
JMSF052E21- CCGGACGGCCTCGTTAACCTAGATAAGCTCCGGGCCGCGATCCGACCCGACACCGGTCTC
JMFF045F05- CCGGACGGCCTCGNTAA-CTAGATAAGCTCCGGGCCGCGATC
JMSF042A16- CCGGACGGCCTCGTTAACCTAGATAAGCTCCGGGCCGCGATCCGACCCGACACCGGTCTC
rJMSF052E21+ CGACACCGGTCTC
____________________________________________________________
consensus CCGGACGGCCTCGTTAACCTAGATAAGCTCCGGGCCGCGATCCGACCCGACACCGGTCTC
. : . : . : . : . : . :
JMSF052E21- GTTTCAATCATGATGGTGAA
JMSF042A16- GTTTCAATCATGATGGTGAATAATGAGATCGGCGTGATTCAGCCCGTCGAG
rJMSF052E21+ GTTTCAATCATGATGGTGAATAATGAGATCGGCGTGATTCAGCCCGTCGAGGAAATCGGG
____________________________________________________________
consensus GTTTCAATCATGATGGTGAATAATGAGATCGGCGTGATTCAGCCCGTCGAGGAAATCGGG
. : . : . : . : . : . :
rJMSF052E21+ AAAATTTGCAGGGAATTCAATGTTCCTTTCCACACCGATGCCGCACAGGCTCTGGGGAAG
____________________________________________________________
consensus AAAATTTGCAGGGAATTCAATGTTCCTTTCCACACCGATGCCGCACAGGCTCTGGGGAAG
. : . : . : . : . : . :
rJMSF052E21+ ATTCAAATCGACGTTGAAACGATGAACATTAGTTTAATGTCGCTAAGTGGGCATAAGATC
____________________________________________________________
consensus ATTCAAATCGACGTTGAAACGATGAACATTAGTTTAATGTCGCTAAGTGGGCATAAGATC
. : . : . : . : . : . :
rJMSF052E21+ TACGGCCCTAAAGGCGTGGGAGCTTTGTACATGAGACGCCGGCCGAGAATTCGAGTTGAG
rJMSF042A16+ TTGAG
____________________________________________________________
consensus TACGGCCCTAAAGGCGTGGGAGCTTTGTACATGAGACGCCGGCCGAGAATTCGAGTTGAG
. : . : . : . : . : . :
rJMSF052E21+ CCCCAAATGAATGGCGGTGGACAGGAGAGA-GGGATTAGGAGT-GGGACTGTTCCAACT-
rJMSF042A16+ CCCCAAATGAATGGCGGTGGACAGGAGAGAGGGGATTAGGAGTGGGGACTGTTCCAACTC
____________________________________________________________
consensus CCCCAAATGAATGGCGGTGGACAGGAGAGAGGGGATTAGGAGTGGGGACTGTTCCAACTC
. : . : . : . : . : . :
rJMFF018D22+ GAAATGGAATATGA
rJMSF052E21+ CCATTGGTAGTAGGG-TTTGGGGCAGCCTGTGAGCTAGCCAACAAGGAAATGGAATATGA
rJMSF042A16+ CCATTGGTAGTAGGGTTTTGGGGCAGCCTGTGAACTAGCCAACAAGGAAATGGAATATGA
rJMSF011H08+ GAAATGGAATATGA
____________________________________________________________
consensus CCATTGGTAGTAGGGTTTTGGGGCAGCCTGTGAGCTAGCCAACAAGGAAATGGAATATGA
. : . : . : . : . : . :
rJMFF018D22+ CNCTGTAAAGATCAAATCTTTACAGGATAGGCTACTGAATGGAATCAAGGCTAGAATTGA
rJMSF052E21+ CACTGTAAAGATCAAATCTTTACAGGATAGGCTACTGAATGGAATCAAGGCTAGAATTGA
rJMSF042A16+ CACTGTAAAGATCAAATCTTTACAGGATAGGCTACTGAATGGAATCAAGGCTAGAATTGA
rJMSF011H08+ CACTGTAAAGATCAAATCTTTACAGGATAGGCTACTGAATGGAATCAAGGCTAGAATTGA
____________________________________________________________
consensus CACTGTAAAGATCAAATCTTTACAGGATAGGCTACTGAATGGAATCAAGGCTAGAATTGA
. : . : . : . : . : . :
rJMFF018D22+ TGGTGTGGTTGTCAATGGCAGTTTAGAGAGGCGCTATGCTGGGAATTTGAACCTGTCTTT
rJMSF052E21+ TGGTGTGGTTGTCAATGGCAGTTTAGAGAGGCGCTATGCTGGGAATTTGAACCTGTCTTT
rJMSF042A16+ TGGTGTGGTTGTCAATGGCAGTTTAGAGAGGCGCTATGCTGGGAATTTGAACCTGTCTTT
rJMSF011H08+ TGGTGTGGTTGTCAATGGCAGTTTAGAGAGGCGCTATGCTGGGAATTTGAACCTGTCTTT
____________________________________________________________
consensus TGGTGTGGTTGTCAATGGCAGTTTAGAGAGGCGCTATGCTGGGAATTTGAACCTGTCTTT
. : . : . : . : . : . :
rJMFF018D22+ CGCGTATGTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGT
rJMSF052E21+ CGCGTATGTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGTTGCAGTGTCGAGCGG
rJMSF004L09+ GTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGTTGCAGTGTCGAGCGG
rJMSF042A16+ CGCGTATGTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGTTGCAGTGTCGAGCGG
rJMSF011H08+ CGCGTATGTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGTTGCAGTGTCGAGCGG
____________________________________________________________
consensus CGCGTATGTGGAGGGCGAGAGCTTGTTGATGGGGCTTAAGGAGGTTGCAGTGTCGAGCGG
. : . : . : . : . : . :
rJMSF004L11+ GAGCCCTCGTATGNTTTGAGGGCGCTGGGAGTGGA
rJMSF052E21+ GAGCGCTTGCACTAGCGCTAGCTTGGAGCCCTCGTATGTTTTGAGGGCGCTGGGAGTGGA
rJMSF004L09+ GAGCGCTTGCACTAGCGCTAGCTTGGAGCCNTCGTATNTTTTGAGGGCNCTGGGAGTGGA
rJMSF042A16+ GAGCGCTTGCACTAGCGCTAGCTTGGAGCCCTCGTATGTTTTGAGGGCGCTGGGAGTGGA
rJMSF011H08+ GAGCGCTTGCACTAGCGCTAGCTTGGAGCCCTCGTATGTTTTGAGGGCGCTGGGAGTGGA
____________________________________________________________
consensus GAGCGCTTGCACTAGCGCTAGCTTGGAGCCCTCGTATGTTTTGAGGGCGCTGGGAGTGGA
. : . : . : . : . : . :
rJMSF004L11+ NGAGGACATGGCACACANGTCGATTAGATATGGAATCGGNCNGTTCACTACAGAGGAGGA
rJMSF052E21+ AGAGGACATGGCACACACGTCGATTAGATATGGAATCGGGCGGTTCACTACAGAGGAGGA
rJMSF004L09+ AGAGGACATGGCACACACGTCGATNAGATATGGAATCGGGCGGTTCNCTACAGAGGAGGA
rJMSF042A16+ AGAGGACATGGCACACACGTCGATTAGATATGGAATCGGGCGGTTCACTACAGAGGAGGA
rJMSF011H08+ AGAGGACATGGCACACACGTCGATTAGATATGGAATCGGGCGGTTCACTACAGAGGAGGA
____________________________________________________________
consensus AGAGGACATGGCACACACGTCGATTAGATATGGAATCGGGCGGTTCACTACAGAGGAGGA
. : . : . : . : . : . :
rJMSF004L11+ GACCGATAGAGCAGNNGAGNTTACAGTGAATCANGTCGAGAAATTGAGGGAGATGAGCCC
rJMSF052E21+ GATTGATAGAGCAGTGGAGCTTACAGTGAATCAGGTCGAGAAATTGAGGGAGATGAGCCC
rJMSF004L09+ GATTGATAGAGCAGTGGAGCTTACAGTGAATCAGGTCGAGAAANTGAGGGAGATGAGCCC
rJMSF042A16+ GATTGATAGAGCAGTGGAGCTTACAGTGAATCAGGTCGAGAAATTGAGGGAGATGAGCCC
rJMSF011H08+ GATTGATAGAGCAGTGGAGCTTACAGTGAATCAGGTCGAGAAATTGAGGGAGATGAGCCC
____________________________________________________________
consensus GATTGATAGAGCAGTGGAGCTTACAGTGAATCAGGTCGAGAAATTGAGGGAGATGAGCCC
. : . : . : . : . : . :
rJMSF004L11+ ANTTTATGAGA
rJMSF052E21+ ACTTTATGAGATGGTTAAGGAAGGCATTGATATTAAGAGTATTCAATGGACACAACACTG
rJMSF004L09+ ACTTTATGAGATGGTTAAGGAAGGCATTGATATNAAGAGTATTCAANGGACACAACACTG
rJMSF042A16+ ACTTTATGAGATGGTTAAGGAAGGCATTGATATTAAGAGTATTCAATGGACACAACACTG
rJMSF011H08+ ACTTTATGAGATGGTTAAGGAAGGCATTGATATTAAGAGTATTCAATGGACACAACACTG
rJMFF045F05+ TTCAATGGACACAACACTG
____________________________________________________________
consensus ACTTTATGAGATGGTTAAGGAAGGCATTGATATTAAGAGTATTCAATGGACACAACACTG
. : . : . : . : . : . :
rJMSF052E21+ ATACATTTCGTTACTGGAGCTTTCATATTCTGATGCTATTAGGTGGCTGCCAGG
rJMSF004L09+ ATACATTTCGTTACTGGAGCTNTCATATTCTGATGCTATTAGGTGGCTNCCAGG
rJMSF042A16+ ATACATTTCGTTACTGGAGCTTTCATATTCTGATGCTATTAGGTGGCTGCCAGG
rJMSF011H08+ ATACATTTCGTTACTGGAGCTTTCATATTCTGATGCTATTAGGTGGCTGCCAGGGTTGCA
rJMFF045F05+ ATACATTTCGTTACTGGAGCTTTCATATTTTGATGCTATTAGGTGGCTGCCAGGGTTGCA
____________________________________________________________
consensus ATACATTTCGTTACTGGAGCTTTCATATTCTGATGCTATTAGGTGGCTGCCAGGGTTGCA
. : . : . : . : . : . :
rJMSF011H08+ GGAATGAACAAAGTTTAGGCAGTGAAAATGGCTTGACAGGAAGATGATGAAGTAAATGAT
rJMFF045F05+ GGAATGAACAAAGTTTAGGCAGTGAAAATGGCTTGACAGGAAGATGATGAAGTAAATGAT
____________________________________________________________
consensus GGAATGAACAAAGTTTAGGCAGTGAAAATGGCTTGACAGGAAGATGATGAAGTAAATGAT
. : . : . : . : . : . :
rJMSF011H08+ AAGGGCAGCATTGGGATTCTTGATTCACTTTGAAATGGGTATCACAATCAGGCCAAAAGG
rJMFF045F05+ AAGGGCAGCATTGGGATTTTTGATTCACTTTGAAATGGGTATCACAATCAGGCCAAAAGG
____________________________________________________________
consensus AAGGGCAGCATTGGGATTTTTGATTCACTTTGAAATGGGTATCACAATCAGGCCAAAAGG
. : . : . : . : . : . :
rJMSF011H08+ GGGATTCTTTAGGAAGGACATTTTGTGGCTGTTTCATCTCTTGTGAAAATCTATTGATAG
rJMFF045F05+ GGGATTCTTTAGGAAGGACATTTTGTGGCTGTTTCATCTCTTGTGAAAATTTATTGATAG
____________________________________________________________
consensus GGGATTCTTTAGGAAGGACATTTTGTGGCTGTTTCATCTCTTGTGAAAATTTATTGATAG
. : . : . : . : . : . :
rJMSF011H08+ AGGTGAGTACATTTTGTCCCAACCCAAAAAGATGTCAGCATTATATTTTCTTGAAAAGAA
rJMFF045F05+ AGGGGAGTACATTTTGTCCCAACCCAAAAAGATGTCAGCATTATATTTTTTTGAAAAGAA
____________________________________________________________
consensus AGGTGAGTACATTTTGTCCCAACCCAAAAAGATGTCAGCATTATATTTTTTTGAAAAGAA
. : . : . : . : . : . :
rJMSF011H08+ GAATACCTGGACCATAAGATATAAAAAGG
rJMFF045F05+ GAATA-CTGGACCATAAGATATAAAAAGGACTTTGGGAATCAGAATATAATTTCAATGTT
____________________________________________________________
consensus GAATACCTGGACCATAAGATATAAAAAGGACTTTGGGAATCAGAATATAATTTCAATGTT