| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004K12 | Sequence | 569 | 007069 (20) | gb|KDO83773.1| | 6e-72 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 789 | 007069 (20) | ref|XP_010106863.1| | 3e-152 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF015D20 | Sequence | 566 | 007069 (20) | gb|KDO83773.1| | 4e-71 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 710 | 007069 (20) | ref|XP_010106863.1| | 5e-137 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF018H18 | Sequence | 561 | 007069 (20) | gb|KDO83773.1| | 2e-70 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 773 | 007069 (20) | ref|XP_010106863.1| | 3e-155 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF024G24 | Sequence | 406 | 007069 (20) | gb|KJB59457.1| | 3e-53 | hypothetical protein B456_009G255300 [Gossypium raimondii] | 784 | 007069 (20) | ref|XP_010106863.1| | 3e-155 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF011F06 | Sequence | 396 | 007069 (20) | gb|KJB59457.1| | 1e-52 | hypothetical protein B456_009G255300 [Gossypium raimondii] | 773 | 007069 (20) | ref|XP_009786904.1| | 5e-162 | PREDICTED: 60S ribosomal protein L3 [Nicotiana sylvestris] |
| JMSF013F21 | Sequence | 214 | 007069 (20) | emb|CDY03839.1| | 5e-23 | BnaC01g29560D [Brassica napus] | 744 | 007069 (20) | ref|XP_010106863.1| | 2e-144 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF015K13 | Sequence | 221 | 007069 (20) | emb|CDY03839.1| | 9e-32 | BnaC01g29560D [Brassica napus] | 778 | 007069 (20) | ref|XP_010106863.1| | 3e-156 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF035F09 | Sequence | 571 | 007069 (20) | gb|KDO83773.1| | 3e-73 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 765 | 007069 (20) | ref|XP_010106863.1| | 4e-144 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF044J22 | Sequence | 669 | 007069 (20) | ref|XP_010062104.1| | 3e-60 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] gb|KCW69169.1| hypothet | 698 | 007069 (20) | ref|XP_010106863.1| | 3e-103 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF048D19 | Sequence | 696 | 007069 (20) | ref|XP_010106863.1| | 6e-107 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein | 767 | 007069 (20) | ref|XP_010106863.1| | 2e-152 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig007069============================================1449 13 --------------------------------------------->JMSF044J22 <-----------------------------------------------rJMSF044J22 106 --------------------------->JMFF024G24 <-----------------------------------------------------rJMFF024G24 106 -------------------------------------->JMFF015D20 <------------------------------------------------rJMFF015D20 121 -------------------------------------->JMFF018H18 <----------------------------------------------------rJMFF018H18 137 ----------------------------------------------->JMSF048D19 <---------------------------------------------------rJMSF048D19 155 -------------------------->JMSF011F06 <----------------------------------------------------rJMSF011F06 166 --------->JMSF013F21 <--------------------------------------------------rJMSF013F21 172 ----------->JMSF015K13 <-----------------------------------------------------rJMSF015K13 211 -------------------------------------->JMFF004K12 <---------------------------------------------rJMFF004K12 214 -------------------------------------->JMSF035F09 <-------------------------------------------rJMSF035F09
The following clones don't have the opposite end in this pair.