| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K12 | Sequence | 569 | 007069 (20) | gb|KDO83773.1| | 6e-72 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 789 | 007069 (20) | ref|XP_010106863.1| | 3e-152 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF015D20 | Sequence | 566 | 007069 (20) | gb|KDO83773.1| | 4e-71 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 710 | 007069 (20) | ref|XP_010106863.1| | 5e-137 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF018H18 | Sequence | 561 | 007069 (20) | gb|KDO83773.1| | 2e-70 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 773 | 007069 (20) | ref|XP_010106863.1| | 3e-155 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMFF024G24 | Sequence | 406 | 007069 (20) | gb|KJB59457.1| | 3e-53 | hypothetical protein B456_009G255300 [Gossypium raimondii] | 784 | 007069 (20) | ref|XP_010106863.1| | 3e-155 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF011F06 | Sequence | 396 | 007069 (20) | gb|KJB59457.1| | 1e-52 | hypothetical protein B456_009G255300 [Gossypium raimondii] | 773 | 007069 (20) | ref|XP_009786904.1| | 5e-162 | PREDICTED: 60S ribosomal protein L3 [Nicotiana sylvestris] |
| JMSF013F21 | Sequence | 214 | 007069 (20) | emb|CDY03839.1| | 5e-23 | BnaC01g29560D [Brassica napus] | 744 | 007069 (20) | ref|XP_010106863.1| | 2e-144 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF015K13 | Sequence | 221 | 007069 (20) | emb|CDY03839.1| | 9e-32 | BnaC01g29560D [Brassica napus] | 778 | 007069 (20) | ref|XP_010106863.1| | 3e-156 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF035F09 | Sequence | 571 | 007069 (20) | gb|KDO83773.1| | 3e-73 | hypothetical protein CISIN_1g038172mg, partial [Citrus sinensis] | 765 | 007069 (20) | ref|XP_010106863.1| | 4e-144 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF044J22 | Sequence | 669 | 007069 (20) | ref|XP_010062104.1| | 3e-60 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] gb|KCW69169.1| hypothet | 698 | 007069 (20) | ref|XP_010106863.1| | 3e-103 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
| JMSF048D19 | Sequence | 696 | 007069 (20) | ref|XP_010106863.1| | 6e-107 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein | 767 | 007069 (20) | ref|XP_010106863.1| | 2e-152 | 60S ribosomal protein L3 [Morus notabilis] gb|EXC12323.1| 60S ribosomal protein |
This contig is upended
. : . : . : . : . : . :
JMSF044J22- GGCCAATCG
____________________________________________________________
consensus GGCCAATCG
. : . : . : . : . : . :
JMSF044J22- CCAAGGTACGCTGCTTACGTTTCTCCATCTCTCGTCAGCTGTTATCCCCTCGAGCATTAC
____________________________________________________________
consensus CCAAGGTACGCTGCTTACGTTTCTCCATCTCTCGTCAGCTGTTATCCCCTCGAGCATTAC
. : . : . : . : . : . :
JMFF018H18- TTGACTGAAGCTCTGCAGCCGGTT
JMFF024G24- GTTATTGACTGAAGCTCTGCAGCCGGTT
JMSF011F06- GAAGCTCTGCAGCCGGTT
JMFF015D20- GTTATTGACTGAAGCTCTGCAGCCGGTT
JMFF004K12- GTTATTGACTGAAGCTCTGCAGCCGGTT
JMSF044J22- AAGTTGAACTCTCATTGATCTCCACTGAATTCATTTGTAGTTCGTTGAAATGAGCTTTTA
JMSF035F09- ATTGACTGAAGCTCTGCAGCCGGTT
JMSF048D19- AGCTCTGCAGCCGGTT
____________________________________________________________
consensus AAGTTGAACTCTCATTGATCTCCACTGAATTCGTTATTGACTGAAGCTCTGCAGCCGGTT
. : . : . : . : . : . :
JMFF018H18- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMFF024G24- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF011F06- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF015K13- AGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF013F21- GATGTCGCACAGGAAGTTTGAGC
JMFF015D20- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMFF004K12- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF044J22- TTCTGTGTATATGTATCTATGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF035F09- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
JMSF048D19- GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
____________________________________________________________
consensus GCCATTCGCCAATCGCCAAGGCTGTGATTCCAGGAAGGATGTCGCACAGGAAGTTTGAGC
. : . : . : . : . : . :
JMFF018H18- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMFF024G24- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF011F06- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF015K13- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF013F21- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMFF015D20- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMFF004K12- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF044J22- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF035F09- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
JMSF048D19- ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
____________________________________________________________
consensus ACCCAAGGCATGGGTCCCTTGGATTTCTTCCCAGGAAGCGTGCTTCTCGTCAAAGGGGAA
. : . : . : . : . : . :
JMFF018H18- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMFF024G24- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF011F06- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF015K13- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF013F21- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTT
JMFF015D20- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMFF004K12- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF044J22- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF035F09- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
JMSF048D19- AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
____________________________________________________________
consensus AGGTGAAGGCATTCCCCAAGGATGACCCAACCAAGCCATGCAGGCTAACTGCATTCTTGG
. : . : . : . : . : . :
JMFF018H18- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMFF024G24- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMSF011F06- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMSF015K13- GTTACAAGGCTGGTATGACCCACATTGT
JMFF015D20- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMFF004K12- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMSF044J22- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMSF035F09- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
JMSF048D19- GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
____________________________________________________________
consensus GTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTTGAGAAACCTGGCTCCAAACTTC
. : . : . : . : . : . :
JMFF018H18- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMFF024G24- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMSF011F06- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCNATTGTGATTGTTG
JMFF015D20- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMFF004K12- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMSF044J22- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMSF035F09- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
JMSF048D19- ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
____________________________________________________________
consensus ACAAGAAAGAGACATGTGAGGCAGTGACAATTGTCGAAACACCTCCAATTGTGATTGTTG
. : . : . : . : . : . :
JMFF018H18- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMFF024G24- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMSF011F06- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMFF015D20- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMFF004K12- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMSF044J22- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMSF035F09- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
JMSF048D19- GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
____________________________________________________________
consensus GAGTTGTTGGCTATGTGAAAACCCCTCGTGGACTTCGCTCCCTCAACACTGTTTGGGCTC
. : . : . : . : . : . :
JMFF018H18- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
JMFF024G24- AACATCTGAATGAGGAGG
JMSF011F06- AACATCTGAATGAGGA
JMFF015D20- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
JMFF004K12- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
JMSF044J22- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
JMSF035F09- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
JMSF048D19- AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
____________________________________________________________
consensus AACATCTGAATGAGGAGGTGAGGAGGAGGTTTTACAAGAACTGGGTCAAATCAAAGAAGA
. : . : . : . : . : . :
JMFF018H18- AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
JMFF015D20- AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
JMFF004K12- AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
JMSF044J22- AAGCTTTCTCCAAGTACTCAAAGAAGTAC-AGTCTGAGGATGGAAAGAAGGATATCCAGG
JMSF035F09- AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
JMSF048D19- AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
____________________________________________________________
consensus AAGCTTTCTCCAAGTACTCAAAGAAGTACGAGTCTGAGGATGGAAAGAAGGATATCCAGG
. : . : . : . : . : . :
JMFF018H18- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACA
JMFF015D20- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCA
JMFF004K12- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCAGA
JMSF044J22- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCAGA
JMSF035F09- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCAGA
JMSF048D19- CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCAGA
rJMSF011F06+ TATGCATGTGTCATTCGTGTTTNGGCTCACACCCAGA
rJMSF015K13+ CACACCCAGA
rJMFF018H18+ ACACCCAGA
rJMFF024G24+ ACACCCAGA
____________________________________________________________
consensus CACAGTTGGATAAGTTGAAGAAATATGCATGTGTCATTCGTGTTTTGGCTCACACCCAGA
. : . : . : . : . : . :
JMFF004K12- T
JMSF044J22- T
JMSF035F09- TAAGG
JMSF048D19- TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMSF011F06+ TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMSF015K13+ TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMFF018H18+ TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMSF048D19+ AAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMFF004K12+ GAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMSF035F09+ CACCTGATGGAGATCCAGGTGAATG
rJMFF024G24+ TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
rJMSF013F21+ ACCTGATGGAGATCCAGGTGAATG
____________________________________________________________
consensus TAAGGAAGATGAAGGGACTGAAGCAGAAGAAGGCTCACCTGATGGAGATCCAGGTGAATG
. : . : . : . : . : . :
JMSF048D19- GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF011F06+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF015K13+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMFF018H18+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF048D19+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMFF015D20+ ACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF044J22+ TTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMFF004K12+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF035F09+ GTGGGACAATTGCGCAGAAGGTTGACNTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMFF024G24+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
rJMSF013F21+ GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
____________________________________________________________
consensus GTGGGACAATTGCGCAGAAGGTTGACTTTGCATATGGCTTCTTTGAGAAGCAGGTACCTG
. : . : . : . : . : . :
JMSF048D19- TTGATGCTGTGTTCCAG
rJMSF011F06+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMSF015K13+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMFF018H18+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMSF048D19+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMFF015D20+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMSF044J22+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMFF004K12+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMSF035F09+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMFF024G24+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
rJMSF013F21+ TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
____________________________________________________________
consensus TTGATGCTGTGTTCCAGAAGGATGAGATGATCGATATCATCGGTGTCACAAAGGGTAAGG
. : . : . : . : . : . :
rJMSF011F06+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMSF015K13+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMFF018H18+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMSF048D19+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMFF015D20+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMSF044J22+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATA-AG
rJMFF004K12+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMSF035F09+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMFF024G24+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
rJMSF013F21+ GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
____________________________________________________________
consensus GTTATGAAGGTGTTGTTACACGATGGGGTGTAACACGTCTTCCTCGTAAAACCCATAGAG
. : . : . : . : . : . :
rJMSF011F06+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMSF015K13+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMFF018H18+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMSF048D19+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMFF015D20+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMSF044J22+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMFF004K12+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMSF035F09+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMFF024G24+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
rJMSF013F21+ GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
____________________________________________________________
consensus GTTTACGCAAAGTTGCCTGTATTGGTGCATGGCATCCTGCTAGAGTTTCCTTCACTGTTG
. : . : . : . : . : . :
rJMSF011F06+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMSF015K13+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMFF018H18+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMSF048D19+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMFF015D20+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMSF044J22+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMFF004K12+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMSF035F09+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMFF024G24+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
rJMSF013F21+ CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
____________________________________________________________
consensus CCCGTGCCGGTCAGAATGGTTACCATCACCGCACTGAATTGAACAAAAAGATCTATAAGC
. : . : . : . : . : . :
rJMSF011F06+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMSF015K13+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMFF018H18+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMSF048D19+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMFF015D20+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMSF044J22+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMFF004K12+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMSF035F09+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMFF024G24+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
rJMSF013F21+ TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
____________________________________________________________
consensus TTGGCAAGGCAGGACAGGAGTCCCATACAGCAATAACCGAGTTTGACAGGACTGAGAAAG
. : . : . : . : . : . :
rJMSF011F06+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMSF015K13+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMFF018H18+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMSF048D19+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMFF015D20+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMSF044J22+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMFF004K12+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMSF035F09+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMFF024G24+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
rJMSF013F21+ ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
____________________________________________________________
consensus ACATTACTCCTATGGGTGGATTTCCTCACTATGGTGTTGTGAAGGATGACTTCATCTTGA
. : . : . : . : . : . :
rJMSF011F06+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMSF015K13+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMFF018H18+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMSF048D19+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMFF015D20+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMSF044J22+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMFF004K12+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMSF035F09+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMFF024G24+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
rJMSF013F21+ TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
____________________________________________________________
consensus TCAAAGGTGGCTGTGTTGGCCCCAAGAAAAGAGTTGTTACGCTCCGCCAAACTCTGCTCA
. : . : . : . : . : . :
rJMSF011F06+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMSF015K13+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMFF018H18+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMSF048D19+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMFF015D20+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMSF044J22+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMFF004K12+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMSF035F09+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMFF024G24+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
rJMSF013F21+ ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
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consensus ACCAGACCTCACGTGTTGCTCTCGAGGAGATTAAGCTCAAATTCATCGATACTTCCTCCA
. : . : . : . : . : . :
rJMSF011F06+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMSF015K13+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMFF018H18+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMSF048D19+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMFF015D20+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMSF044J22+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMFF004K12+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMSF035F09+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMFF024G24+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
rJMSF013F21+ AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
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consensus AGTTTGGACACGGTCGTTTCCAGACCACACAGGAGAAGCAGAAATTCTATGGTCGTCTCA
. : . : . : . : . : . :
rJMSF011F06+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMSF015K13+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMFF018H18+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCGTTTTGGAATTTTGAAA
rJMSF048D19+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMFF015D20+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMSF044J22+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMFF004K12+ AGGCTTAAGT
rJMSF035F09+ AGGCTTAAGT
rJMFF024G24+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
rJMSF013F21+ AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
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consensus AGGCTTAAGTTCCCTGTTATATCACAGTTTTTTTCGTGTCTTCATTTTGGAATTTTGAAA
. : . : . : . : . : . :
rJMSF011F06+ TTTTGTTTTGTCTTTT
rJMSF015K13+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACC
rJMFF018H18+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTA
rJMSF048D19+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACAT
rJMFF015D20+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACCCTACCCA
rJMSF044J22+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACC
rJMFF024G24+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACCCTACCCA
rJMSF013F21+ TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACCCTACCCAAGGCT
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consensus TTTTGTTTTGTCTTTTGTAAAACAACCAGAGTACATTTTAGCTATACCCTACCCAAGGCT