clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003B13 | Sequence | 580 | 000193 (9) | ref|XP_009385541.1| | 6e-110 | PREDICTED: glutamine synthetase nodule isozyme-like [Musa acuminata subsp. mala | 732 | 000193 (9) | gb|ABK94916.1| | 5e-142 | unknown [Populus trichocarpa] |
JMFF006I04 | Sequence | 576 | 000193 (9) | ref|XP_009385541.1| | 9e-107 | PREDICTED: glutamine synthetase nodule isozyme-like [Musa acuminata subsp. mala | 788 | 000193 (9) | gb|ABK94916.1| | 4e-141 | unknown [Populus trichocarpa] |
JMFF011L14 | Sequence | 411 | 000193 (9) | ref|XP_009385541.1| | 3e-67 | PREDICTED: glutamine synthetase nodule isozyme-like [Musa acuminata subsp. mala | 761 | 000193 (9) | ref|XP_006374208.1| | 4e-135 | glutamine synthetase family protein [Populus trichocarpa] gb|ERP52005.1| glutami |
JMFF034B04 | Sequence | 532 | 000193 (9) | ref|XP_006391363.1| | 2e-11 | hypothetical protein EUTSA_v10018774mg [Eutrema salsugineum] gb|ESQ28649.1| hypo | 678 | 000193 (9) | ref|XP_006374208.1| | 9e-120 | glutamine synthetase family protein [Populus trichocarpa] gb|ERP52005.1| glutami |
JMSF010O22 | Sequence | 252 | 000193 (9) | gb|AAA33762.1| | 8e-38 | glutamine synthetase, partial [Phaseolus vulgaris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000193============================================1476 1 -------------------------------->JMFF034B04 <---------------------------------------------rJMFF034B04 424 --------------------------->JMFF003B13 <------------------------------------------------rJMFF003B13 445 ---->JMFF011L14 <---------------------------------------------------rJMFF011L14 456 ------------------------>JMFF006I04 <----------------------------------------------------rJMFF006I04
The following clones don't have the opposite end in this pair.
------------->JMSF010O22-