List of clones in pair P012616.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027A06Sequence490013337 (14)ref|XP_011026951.1|7e-74PREDICTED: 40S ribosomal protein S3a-2 [Populus euphratica]701013337 (14)ref|XP_011090682.1|8e-122PREDICTED: 40S ribosomal protein S3a [Sesamum indicum]
JMFF034E21Sequence572013337 (14)sp|P33444.4|RS3A_CATRO5e-94RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07 protein [Catharant709013337 (14)ref|XP_011090682.1|4e-130PREDICTED: 40S ribosomal protein S3a [Sesamum indicum]
JMSF011O18Sequence248013337 (14)gb|ABK56834.1|3e-10RPS3 [Cymbidium hybrid cultivar]784013337 (14)ref|XP_011090682.1|3e-156PREDICTED: 40S ribosomal protein S3a [Sesamum indicum]
JMSF015N15Sequence501013337 (14)dbj|BAA05057.1|1e-72cyc07 [Catharanthus roseus]722013337 (14)ref|XP_011090682.1|7e-137PREDICTED: 40S ribosomal protein S3a [Sesamum indicum]
JMSF020E15Sequence257013337 (14)ref|XP_002283142.1|2e-09PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera] sp|A5B4K1.1|RS3A1_VITVI 204013337 (14)ref|XP_002283142.1|1e-09PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera] sp|A5B4K1.1|RS3A1_VITVI
JMSF025C18Sequence648013337 (14)sp|P33444.4|RS3A_CATRO6e-111RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07 protein [Catharant765013337 (14)ref|XP_011090682.1|1e-136PREDICTED: 40S ribosomal protein S3a [Sesamum indicum]

Contig 13337 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013337============================================1002         
  40 -------------------------------------------------------->JMFF034E21                                              
                              <----------------------------------------------------------------------rJMFF034E21  
 122       ------------------------------------------>JMSF015N15                                                      
                             <---------------------------------------------------------------------rJMSF015N15  
 126       ----------------->JMSF011O18                                                                               
                    <-----------------------------------------------------------------------------rJMSF011O18  
 198 ------------------------------------------------>JMFF027A06                                                      
                                 <---------------------------------------------------rJMFF027A06  
 255       --------------------------------------------------------->JMSF025C18                                       
                            <--------------------------------------------------------rJMSF025C18  
 809                                                                           ------------------------->JMSF020E15   
                                                                                <------------------rJMSF020E15

The following clones don't have the opposite end in this pair.

            <----------------------------------------------------------------------------------------rJMSF052O23#     
     -------------------->JMSF004B09*