List of clones in pair P012561.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A22Sequence479011709 (11)gb|ADV02778.1|3e-94actin depolymerizing factor 1 [Ipomoea batatas]716011709 (11)gb|ADV02778.1|2e-92actin depolymerizing factor 1 [Ipomoea batatas]
JMFN025K08Sequence624011709 (11)gb|ADV02778.1|5e-95actin depolymerizing factor 1 [Ipomoea batatas]
JMFN033G02Sequence588011709 (11)ref|XP_010528350.1|3e-20PREDICTED: actin-depolymerizing factor 1-like [Tarenaya hassleriana]
JMFN033I02Sequence588011709 (11)ref|XP_010528350.1|3e-20PREDICTED: actin-depolymerizing factor 1-like [Tarenaya hassleriana]
JMSF001B12Sequence176011709 (11)emb|CDX88731.1|8e-17BnaA03g09180D [Brassica napus]729011709 (11)gb|ADV02778.1|2e-94actin depolymerizing factor 1 [Ipomoea batatas]
JMSF034K11Sequence686011709 (11)gb|ADV02778.1|1e-94actin depolymerizing factor 1 [Ipomoea batatas]746011709 (11)gb|ADV02778.1|1e-76actin depolymerizing factor 1 [Ipomoea batatas]
JMSF052K18Sequence690011709 (11)gb|ADV02778.1|1e-94actin depolymerizing factor 1 [Ipomoea batatas]681011709 (11)gb|ADV02778.1|9e-95actin depolymerizing factor 1 [Ipomoea batatas]

Contig 11709 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011709============================================ 962         
  92    ---------------------------------------------------------------------->JMSF034K11                             
                    <-----------------------------------------------------------------------------rJMSF034K11  
 201    ----------------->JMSF001B12                                                                                  
            <--------------------------------------------------------------------------rJMSF001B12  
 279    ------------------------------------------------->JMFF002A22                                                  
     <-------------------------------------------------------------------------rJMFF002A22  
 289    ---------------------------------------------------------------------->JMSF052K18                             
        <---------------------------------------------------------------------rJMSF052K18

The following clones don't have the opposite end in this pair.

                                            <--------------------------------------------------------JMFN033G02-      
                                            <------------------------------------------------------------JMFN033I02-  
         ---------------------------------------------------------------->JMFN025K08-