clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN001G11 | Sequence | 575 | 000950 (5) | ref|XP_011092243.1| | 2e-49 | PREDICTED: PHD finger protein Alfin1-like [Sesamum indicum] | |||||
JMSF017M21 | Sequence | 437 | 000950 (5) | gb|KJB66551.1| | 3e-27 | hypothetical protein B456_010G143400 [Gossypium raimondii] | 777 | 000950 (5) | ref|NP_001274878.1| | 8e-101 | putative alfin-like transcription factor [Solanum tuberosum] gb|AAY27262.1| puta |
JMSF044P10 | Sequence | 690 | 000950 (5) | ref|XP_011092243.1| | 2e-75 | PREDICTED: PHD finger protein Alfin1-like [Sesamum indicum] | 644 | 000950 (5) | ref|NP_001274878.1| | 4e-75 | putative alfin-like transcription factor [Solanum tuberosum] gb|AAY27262.1| puta |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000950============================================1187 1 --------------------------------------------------------->JMSF044P10 <-----------------------------------------------------rJMSF044P10 48 ------------------------------------>JMSF017M21 <----------------------------------------------------------------rJMSF017M21
The following clones don't have the opposite end in this pair.
----------------------------------------------->JMFN001G11-