clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF006E11 | Sequence | 567 | 000887 (8) | ref|XP_009601157.1| | 9e-49 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | |||||
JMFF007H03 | Sequence | 134 | 000887 (8) | ref|XP_010279287.1| | 7e-06 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic | |||||
JMFF047K24 | Sequence | 470 | 000887 (8) | ref|XP_009601157.1| | 8e-48 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | 476 | 000887 (8) | gb|KJB22974.1| | 3e-50 | hypothetical protein B456_004G076300 [Gossypium raimondii] |
JMFS009H07 | Sequence | 619 | 000887 (8) | gb|ADZ24708.1| | 4e-88 | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii] | |||||
JMFS015H10 | Sequence | 541 | 000887 (8) | gb|ADZ24708.1| | 8e-68 | 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii] | |||||
JMSF038D10 | Sequence | 600 | 000887 (8) | ref|XP_009601157.1| | 5e-60 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- | 887 | 000887 (8) | ref|XP_009796397.1| | 3e-148 | PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic- |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000887============================================1350 66 ------------------------------------------->JMSF038D10 <-----------------------------------------------------------------rJMSF038D10 82 ---------------------------------->JMFF047K24 <----------------------------------rJMFF047K24
The following clones don't have the opposite end in this pair.
--------------------------------------------->JMFS009H07- --------------------------------------->JMFS015H10- <---------rJMFF007H03- ----------------------------------------->JMFF006E11-