Contig 000887:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E11Sequence567000887 (8)ref|XP_009601157.1|9e-49PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-
JMFF007H03Sequence134000887 (8)ref|XP_010279287.1|7e-06PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic
JMFF047K24Sequence470000887 (8)ref|XP_009601157.1|8e-48PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-476000887 (8)gb|KJB22974.1|3e-50hypothetical protein B456_004G076300 [Gossypium raimondii]
JMFS009H07Sequence619000887 (8)gb|ADZ24708.1|4e-882-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii]
JMFS015H10Sequence541000887 (8)gb|ADZ24708.1|8e-682-methyl-6-phytyl-1,4-benzoquinone methyltransferase 1 [Solanum pennellii]
JMSF038D10Sequence600000887 (8)ref|XP_009601157.1|5e-60PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-887000887 (8)ref|XP_009796397.1|3e-148PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-

Alignment

This contig is upended


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rJMFF047K24-                                        CCTTATGGCGGATCACCCTGGAGAGTTTTT
                      ____________________________________________________________
consensus                                           CCTTATGGCGGATCACCCTGGAGAGTTTTT
 
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rJMFF047K24-          TTTTTTTTTTTACATCAATGACACACATGAGCATATTACTGACAGTAGCAACAAGCACCA
rJMSF038D10-                                              TACTGACAGTAGCAACAAGCACCA
                      ____________________________________________________________
consensus             TTTTTTTTTTTACATCAATGACACACATGAGCATATTACTGACAGTAGCAACAAGCACCA
 
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rJMFF047K24-          CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
rJMSF038D10-          CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
                      ____________________________________________________________
consensus             CACTACATTCATATAATAATACATTTATTATTACGACAGTAGCTCACCTAATAATCTATA
 
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rJMFF047K24-          AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
rJMSF038D10-          AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
                      ____________________________________________________________
consensus             AAACCAGGAAACTACGAGATCTTCTCTGCTATTTCTCATATTGGTTGGTCTTTCGGAACG
 
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rJMFF047K24-          ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
rJMSF038D10-          ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
                      ____________________________________________________________
consensus             ATCTGATCCTTGAGCCACATATATATGGGAACCAAAACATAATATGCTCCTGCCATGGCC
 
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rJMFF047K24-          CCTAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
rJMSF038D10-          CCCAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
                      ____________________________________________________________
consensus             CCTAACATGAAGCGCAGAAGAAACACAAGCGGATTCACGGGCTTTGAGACATCCTCAGCC
 
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rJMFF047K24-          TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
rJMSF038D10-          TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
                      ____________________________________________________________
consensus             TTTGGACCAAGCTGTAGCGGTGAGTCTCCAGAGTCGGTTTTTACACCAGTTACGGAGCAG
 
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rJMFF047K24-          CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGANG
rJMSF038D10-          CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGAGT
                      ____________________________________________________________
consensus             CCCATGATCAGACCATGTCTACGAACCCCACGGTACCATTTTGGGCCAATCCTCTTGAGT
 
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rJMFF047K24-          TGAACATCCCTTAATCCAGCCTTTTC                                  
rJMSF038D10-          TGAACATCCTTAAATCCAGCCTTTTCAAACCACTCAAGATACTCCGACTCCTTTGGAAAG
                      ____________________________________________________________
consensus             TGAACATCCTTTAATCCAGCCTTTTCAAACCACTCAAGATACTCCGACTCCTTTGGAAAG
 
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rJMSF038D10-          AGCATCCAGACATCAGCAAAGAATCGCGACAGCCAAAACGTCGGGTGAACAGGACCAATT
                      ____________________________________________________________
consensus             AGCATCCAGACATCAGCAAAGAATCGCGACAGCCAAAACGTCGGGTGAACAGGACCAATT
 
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rJMSF038D10-          AGGCAAGCCTTTCCTCCAGGTTTTAAAACTCTGTATGCTTCCCTGATTCCACGCTGTGGG
                      ____________________________________________________________
consensus             AGGCAAGCCTTTCCTCCAGGTTTTAAAACTCTGTATGCTTCCCTGATTCCACGCTGTGGG
 
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rJMSF038D10-          TCTGGCCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
JMFS009H07+                CCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
                      ____________________________________________________________
consensus             TCTGGCCAGTACTCAATACTCCCAGCAGAAACATATCTATCAGCATAATCAGTGGTGAAG
 
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rJMFF007H03-                                    GATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
rJMSF038D10-          GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
JMFS015H10+                                     GATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
JMFS009H07+           GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
                      ____________________________________________________________
consensus             GGAAGATCCTCAGCATCACCCTCAATGATTTTGCAATCCTTCAAGGGCTCCTTCTCCTTA
 
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rJMFF007H03-          NCCTTANCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
rJMSF038D10-          GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFS015H10+           GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFS009H07+           GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFF006E11+            CCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
JMFF047K24+                                                           GCATCCACATGC
JMSF038D10+            CCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
                      ____________________________________________________________
consensus             GCCTTAGCAAGCTGGTGAGGGGACTGATCAAGAATGGTAACATTCTTGGCATCCACATGC
 
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rJMFF007H03-          TTCACTATCCCCANAGTGGTGAACCCTGTGCCACCCCCAA                    
rJMSF038D10-          TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFS015H10+           TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFS009H07+           TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMFF006E11+           TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAACCATCCACCACAGTCAAATT
JMFF047K24+           TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
JMSF038D10+           TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
                      ____________________________________________________________
consensus             TTCACTATCCCCAGAGTGGTGAACCCTGTGCCACCCCCAA-CATCCACCACAGTCAAATT
 
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rJMSF038D10-          CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGT-CNGTGNCC
JMFS015H10+           CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFS009H07+           CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFF006E11+           CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMFF047K24+           CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
JMSF038D10+           CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
                      ____________________________________________________________
consensus             CCTGTCATTCAGCTCAGCTGGTTCAAGGGCATCATCTCTCATGTCTTCTGTCCAGTGCCC
 
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rJMSF038D10-          TGGGTTTATCACATGGTCATACACA                                   
JMFS015H10+           TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFS009H07+           TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFF006E11+           TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMFF047K24+           TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
JMSF038D10+           TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
                      ____________________________________________________________
consensus             TGGGTTTATCACATGGTCATACACAATAGAGAGGAACCTGTAGAACCAAAATGCCTCCTG
 
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JMFS015H10+           CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFS009H07+           CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFF006E11+           CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMFF047K24+           CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
JMSF038D10+           CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
                      ____________________________________________________________
consensus             CTTGTGCTGAATGAATCTTGGCATTGAGACTGGCCTGGATGCAGAAATGCTGCATTTTGG
 
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JMFS015H10+           AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFS009H07+           AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFF006E11+           AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMFF047K24+           AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
JMSF038D10+           AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
                      ____________________________________________________________
consensus             AGCTAGGGTTTGATTCTTTCTTCTGGGTTGAGAAAACAGACTCAGATTGGGAAGTTGGGT
 
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JMFS015H10+           TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFS009H07+           TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFF006E11+           TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMFF047K24+           TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
JMSF038D10+           TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
                      ____________________________________________________________
consensus             TCCTCTCACATTTGAGCCAATAAAAGATAGCCCCTTTGGGTTTTGGCTAATTTTTGGGAG
 
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JMFS015H10+           AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFS009H07+           AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFF006E11+           AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMFF047K24+           AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
JMSF038D10+           AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
                      ____________________________________________________________
consensus             AATACAGAGACTCTCAGCAGCAATGAGCATCGAATTGGCCATGGAATCTTTCTGGAATCT
 
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JMFS015H10+           GCGAAAAGATTTTTCCCTTTGTGAA                                   
JMFS009H07+           GCGAAAAGATTTTTCCCTTTGTGAA                                   
JMFF006E11+           GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
JMFF047K24+           GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGCAAGT                     
JMSF038D10+           GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
                      ____________________________________________________________
consensus             GCGAAAAGATTTTTCCCTTTGTGAACAACAGTAGAAAGTACCAAACGAATTAGCACTGAG
 
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JMFF006E11+           TCAGTCACTGGGCTAAGTGATGGCAATC                                
JMSF038D10+           TCAGTCACTGGGCTAAGTGATGGCAATCGGAAGAGAAATGTTACGGACTCCTCAGTCCCC
                      ____________________________________________________________
consensus             TCAGTCACTGGGCTAAGTGATGGCAATCGGAAGAGAAATGTTACGGACTCCTCAGTCCCC