List of clones in pair P012346.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003G21Sequence496003055 (25)654003055 (25)
JMFF006I07Sequence493003055 (25)733003055 (25)
JMFF024F21Sequence102003055 (25)547003055 (25)
JMFF029P01Sequence315003055 (25)704003055 (25)
JMFF035D12Sequence490003055 (25)723003055 (25)
JMFN008P02Sequence620003055 (25)
JMFN010H19Sequence591003055 (25)
JMFN011M03Sequence582003055 (25)
JMFN016G23Sequence599003055 (25)
JMFN019I01Sequence604003055 (25)
JMFN020I05Sequence228003055 (25)
JMFN020L19Sequence614003055 (25)
JMFN025N15Sequence612003055 (25)
JMFN029K04Sequence615003055 (25)
JMFN031A02Sequence597003055 (25)
JMFN039I20Sequence637003055 (25)
JMFN040C13Sequence609003055 (25)
JMFN042K17Sequence613003055 (25)
JMFN045F07Sequence597003055 (25)
JMFN045G15Sequence607003055 (25)

Contig 3055 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003055============================================ 846         
   3 --------------------------------------------------------->JMFF006I07                                             
                  <--------------------------------------------------------------------------------------rJMFF006I07  
  16 ---------------------------------------------------------->JMFF003G21                                            
                          <----------------------------------------------------------------------------rJMFF003G21  
  21  ------------------------------------>JMFF029P01                                                                 
                    <----------------------------------------------------------------------------------rJMFF029P01  
  28 --------------------------------------------------------->JMFF035D12                                             
                  <-----------------------------------------------------------------------------------rJMFF035D12  
 168 ----------->JMFF024F21                                                                                           
                     <----------------------------------------------------------------rJMFF024F21  

The following clones don't have the opposite end in this pair.

        ----------------------------------------------------------------------->JMFN040C13-                           
         ---------------------------------------------------------------------->JMFN045F07-                           
          ---------------------------------------------------------------------->JMFN039I20-                          
        ----------------------------------------------------------------------->JMFN025N15-                           
        -------------------------------------------------------------------->JMFN019I01-                              
          ------------------------------------------------------------------->JMFN020L19-                             
                    <--------------------------------------------------------------------JMFN029K04-                  
         ----------------------------------------------------------------------->JMFN042K17-                          
          -------------------------------------------------------------------->JMFN011M03-                            
        ----------------------------------------------------------------------->JMFN045G15-                           
         -------------------------------------------------------------------->JMFN031A02-                             
        ------------------------------------------------------------------------>JMFN008P02-                          
         ---------------------------------------------------------------------->JMFN016G23-                           
         --------------------------------------------------------------------->JMFN010H19-                            
        -------------------------->JMFN020I05-