Contig 003055:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF006I07-                                                                TTATTA
                      ____________________________________________________________
consensus                                                                   TTATTA
 
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rJMFF029P01-                    AATATCAGAGTACACATTTTCTTCGATGTAATTAAGCTAATAATAATTAA
rJMFF003G21-                    AATATCAGAGTACACATTTTCTTCGATGTAATTAAGCTAATAATAATTAA
rJMFF006I07-          AATTAAAACAAATATCAGAGTACACATTTTCTTCGATGTAATTAAGCTAATAATAATTAA
rJMFF035D12-                              TACACATTTTCTTCGATGTAATTAAGCTAATAATAATTAA
                      ____________________________________________________________
consensus             AATTAAAACAAATATCAGAGTACACATTTTCTTCGATGTAATTAAGCTAATAATAATTAA
 
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rJMFF029P01-          ACCTAAAGAGACGTAACATTGAAAAGGGAATAAACCAAACGTTTTTGTTTTATGTTTTAT
rJMFF003G21-          ACCTAAAGAGACGTAACATTGAAAAGGGAATAAACCAAACGTTTTTGTTTTATGTTTTAT
rJMFF006I07-          ACCTAAAGAGACGTAACATTGAAAGGGGAATAAACCAAACGTTTTTGTTTTATGTTTTAT
rJMFF035D12-          ACCTAAAGAGACGTAACATTGAAAAGGGAATAAACCAAACGTTTTTGTTTTATGTTTTAT
                      ____________________________________________________________
consensus             ACCTAAAGAGACGTAACATTGAAAAGGGAATAAACCAAACGTTTTTGTTTTATGTTTTAT
 
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rJMFF029P01-          TTTTTATTTTTTTTTCTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
rJMFF003G21-          TTTTTATTTTTTTTTCTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
rJMFF006I07-          TTTTTATTTTTTTTTCTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
JMFN029K04-                          CTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
rJMFF024F21-                                                  TATTCTTTCATCTTATTTGT
rJMFF035D12-          TTTTTATTTTTTTTTCTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
                      ____________________________________________________________
consensus             TTTTTATTTTTTTTTCTTATTGCTACTAATTAATTAATTATATTCTTTCATCTTATTTGT
 
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rJMFF029P01-          TTTGTTTTGTTTTCATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
rJMFF003G21-          TTTGTTTTGTTTTCATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
rJMFF006I07-          TTTGTTTTGTTTTCATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN029K04-           TTTGTTTTGTTTTCATCTTAGTAAATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
rJMFF024F21-          TTTGTTTTGTTTTCATCTTAGNAGATNGCTACGCGCCGTTGCTGATAATTTCTGCNGGGG
rJMFF035D12-          TTTGTTTTGTTTTCATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN042K17+                        CATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN025N15+                                  GATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN045G15+                                      GCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN040C13+                                      GCTACGCGCCGTGNCTGATAATTTCTGCAGGGG
JMFN039I20+                              AGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN016G23+                                      GCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN045F07+                                        TACGCGCCGTTGCTGATAATTTCTGCAGGGG
JMFN010H19+                                               CGTTGCTGATAATTTCTGCAGGGG
JMFN020L19+                                                          ATTTCTGCAGGGG
JMFN031A02+                                                      GATAATTTCTGCAGGGG
JMFN011M03+                                                GTTGCTGATAATTTCTGCAGGGG
JMFN019I01+                                                            TTCTGCAGGGG
JMFN008P02+                             TAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
                      ____________________________________________________________
consensus             TTTGTTTTGTTTTCATCTTAGTAGATAGCTACGCGCCGTTGCTGATAATTTCTGCAGGGG
 
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rJMFF029P01-          GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
rJMFF003G21-          GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
rJMFF006I07-          GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN029K04-           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
rJMFF024F21-          GCANACTACTACCGGCGTNNCTCCCTCCGGCGGCGGCNGNTGACCCNCCTCCGCCGAGGC
rJMFF035D12-          GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN042K17+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN025N15+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN045G15+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN040C13+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN039I20+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN016G23+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN045F07+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN010H19+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN020L19+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN031A02+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN011M03+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
JMFN019I01+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCACCGCCAAGGC
JMFN008P02+           GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
                      ____________________________________________________________
consensus             GCACACTACTACCGGCGTCGCTCCCTCCGGCGGCGGCGGCTGACCCGCCTCCGCCAAGGC
 
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rJMFF029P01-          CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
rJMFF003G21-          CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
rJMFF006I07-          CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTACCGATCCAAACGGTG
JMFN029K04-           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
rJMFF024F21-          CATCATCAANTCTANNCCCNGATGGGCCTCCGGGACCTCCNCCTATCGATCCAANCGGTG
rJMFF035D12-          CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN042K17+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN025N15+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN045G15+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN040C13+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN039I20+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN016G23+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN045F07+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN010H19+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN020L19+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN031A02+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN011M03+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN019I01+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFN008P02+           CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
JMFF035D12+                                                           ATCCAAACGGTG
JMFF006I07+                                                          GATCCAAACGGTG
JMFF003G21+                                                       ATCGATCCAAACGGTG
                      ____________________________________________________________
consensus             CAGCATCAAGTCTAGTCCCAAATGGGCCTCCGGGACCTCCACCTATCGATCCAAACGGTG
 
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rJMFF029P01-          ATGAGCCAACAGGAAAGCCTCCATAGCCANACCCAATTCCGCTTCCACCTCCGGCGTCGT
rJMFF003G21-          ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
rJMFF006I07-          ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN029K04-           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
rJMFF024F21-          ATGAGCCAANAGGAANGCCTCCATAGCNANACCCNATTCNGCTTCCNCCTCCGGCGTCGT
rJMFF035D12-          ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN042K17+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN025N15+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN045G15+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN040C13+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN039I20+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN016G23+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN045F07+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN010H19+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN020L19+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN031A02+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN011M03+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN019I01+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFN008P02+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFF035D12+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFF006I07+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
JMFF003G21+           ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
                      ____________________________________________________________
consensus             ATGAGCCAACAGGAAAGCCTCCATAGCCAGACCCAATTCCGCTTCCACCTCCGGCGTCGT
 
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rJMFF029P01-          AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
rJMFF003G21-          AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGNCCAGCACCGAAACCCGAGGAACCAC
rJMFF006I07-          AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN029K04-           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
rJMFF024F21-          ANCNNGATGCGCCACCGGGAANGCCAAACCNAGGNCCAGCACCGAAACCCGAGGAACCAC
rJMFF035D12-          AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN042K17+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN025N15+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN045G15+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN040C13+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN039I20+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN016G23+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN045F07+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN010H19+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN020L19+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN031A02+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN011M03+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN019I01+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFN008P02+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFF035D12+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFF006I07+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
JMFF003G21+           AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
                      ____________________________________________________________
consensus             AGCCAGATGCGCCACCGGGAAGGCCAAACCCAGGTCCAGCACCGAAACCCGAGGAACCAC
 
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rJMFF029P01-          CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
rJMFF003G21-          CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
rJMFF006I07-          CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN029K04-           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
rJMFF024F21-          CGCCANANCCTCCTCCGAANCTAGACCCGAACCCACCCCCGGATCCGGGNTGATCANAAC
rJMFF035D12-          CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN042K17+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN025N15+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN045G15+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN040C13+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN039I20+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN016G23+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN045F07+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN010H19+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN020L19+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN031A02+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN011M03+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN019I01+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFN008P02+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFF035D12+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFF006I07+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
JMFF029P01+                                                   GGATCCGGGTTGATCANAAC
JMFF003G21+           CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
                      ____________________________________________________________
consensus             CGCCAAACCCTCCTCCGAAGCTAGACCCGAACCCACCCCCGGATCCGGGTTGATCAAAAC
 
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rJMFF029P01-          CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
rJMFF003G21-          CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGNCAAGAAAACCCGGCC
rJMFF006I07-          CCGACCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN029K04-           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
rJMFF024F21-          CCNATCCACCACCGNNGATGNCTGGGGNANGAAACCCGCCGCCGCCAANAAAACCCGGTC
rJMFF035D12-          CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN042K17+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN025N15+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN045G15+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAAACCGGCC
JMFN040C13+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN039I20+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN016G23+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN045F07+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN010H19+           CCGATCCACCACCACCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN020L19+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN031A02+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN011M03+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN019I01+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN008P02+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFF035D12+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFF006I07+           CCGACCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFF029P01+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
JMFN020I05+                                                            AAAACCCGGCC
JMFF003G21+           CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
                      ____________________________________________________________
consensus             CCGATCCACCACCGCCGATGTCTGGGGTAGGAAACCCGCCGCCGCCAAGAAAACCCGGCC
 
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rJMFF029P01-          CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
rJMFF003G21-          CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
rJMFF006I07-          CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN029K04-           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
rJMFF024F21-          CTCCGNCGAACCNAGATCCTCCTCCTCCACCGCCGAAGNAAGGAGGAAACNCNTATTTGT
rJMFF035D12-          CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN042K17+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN025N15+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN045G15+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN040C13+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN039I20+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN016G23+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN045F07+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN010H19+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN020L19+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN031A02+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN011M03+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN019I01+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN008P02+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFF035D12+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFF006I07+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFF029P01+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
JMFN020I05+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCNGAAGTAGGGAGGAAACCCATATTTGT
JMFF003G21+           CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
                      ____________________________________________________________
consensus             CTCCGCCGAACCCAGATCCTCCTCCTCCACCGCCGAAGTAGGGAGGAAACCCATATTTGT
 
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rJMFF029P01-          AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCAC      
rJMFF003G21-          AG                                                          
rJMFF006I07-          AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN029K04-           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCNTCCATCCTTCACTGC   
rJMFF024F21-          NGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAAT             
rJMFF035D12-          AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN042K17+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN025N15+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN045G15+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN040C13+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN039I20+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN016G23+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN045F07+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN010H19+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN020L19+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN031A02+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN011M03+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN019I01+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN008P02+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFF035D12+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFF006I07+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFF029P01+           AGTGGAAGAAAGTTTTNTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFN020I05+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
JMFF003G21+           AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
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consensus             AGTGGAAGAAAGTTTTCTGATCATCATCAACACCTTTCTTCTCCAATCCTTCACTGCCGG
 
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rJMFF006I07-          CGGCCGG                                                     
rJMFF035D12-          CGGCCGG                                                     
JMFN042K17+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN025N15+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN045G15+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN040C13+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN039I20+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN016G23+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN045F07+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN010H19+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN020L19+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN031A02+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN011M03+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN019I01+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN008P02+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFF035D12+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFF006I07+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFF029P01+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFN020I05+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFF024F21+                             CGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
JMFF003G21+           CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
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consensus             CGGCCGGACTAGCATTTGCGGCACAAACAAGGGCTCCGGCAAGGATTAACAGGAGAACTT
 
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JMFN042K17+           TAGTCGCCATTTCCAGTGACGACTTG                                  
JMFN025N15+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTG                         
JMFN045G15+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATT                          
JMFN040C13+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGA                        
JMFN039I20+           TAGTCGCCATTTCCAGTGA                                         
JMFN016G23+           TAGTCGCCATTTCCAGTGACGACTTG                                  
JMFN045F07+           TAGTCGCCATTTCCAGTGACGACTTG                                  
JMFN010H19+           TAGTCGCCATTTCCAGTGACGACTTGT                                 
JMFN020L19+           TAGTCGCCATTTCCAGTGACGA                                      
JMFN031A02+           TAGTCGCCATTTCCAGTGACGACTTGT                                 
JMFN011M03+           TAGTCGCCATTTCCAGTGA                                         
JMFN019I01+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAA                            
JMFN008P02+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAA                      
JMFF035D12+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAATATT  
JMFF006I07+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAATATT  
JMFF029P01+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAAT     
JMFN020I05+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATT                          
JMFF024F21+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAATATT  
JMFF003G21+           TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAATATTGC
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consensus             TAGTCGCCATTTCCAGTGACGACTTGTTGAAATTGAAATGATTTGGGATGAGAATATTGC