clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF028M14 | Sequence | 510 | 005256 (17) | ref|XP_009625574.1| | 5e-54 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 647 | 005256 (17) | ref|XP_010270375.1| | 1e-56 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Nelumbo |
JMFF042I20 | Sequence | 630 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 648 | 005256 (17) | ref|XP_009625574.1| | 6e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
JMFF042L20 | Sequence | 645 | 005256 (17) | ref|XP_009625574.1| | 4e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 402 | 005256 (17) | ref|XP_007048403.1| | 1e-49 | Photosystem I reaction center subunit PSI [Theobroma cacao] gb|EOX92560.1| Photo |
JMFF051L09 | Sequence | 630 | 005256 (17) | ref|XP_009625574.1| | 2e-65 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 427 | 005256 (17) | ref|XP_007048403.1| | 9e-49 | Photosystem I reaction center subunit PSI [Theobroma cacao] gb|EOX92560.1| Photo |
JMFN012H23 | Sequence | 633 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | |||||
JMSF032B19 | Sequence | 717 | 005256 (17) | ref|XP_009625574.1| | 8e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 658 | 005256 (17) | ref|XP_009625574.1| | 4e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
JMSF036J02 | Sequence | 653 | 005256 (17) | ref|XP_009625574.1| | 4e-65 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 609 | 005256 (17) | ref|XP_010270375.1| | 4e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Nelumbo |
JMSF043B03 | Sequence | 618 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 613 | 005256 (17) | ref|XP_009374210.1| | 4e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Pyrus x |
JMSF053A13 | Sequence | 680 | 005256 (17) | ref|XP_009625574.1| | 5e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 685 | 005256 (17) | ref|XP_009625574.1| | 6e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005256============================================ 803 27 ----------------------------------------------------------------------------->JMFF051L09 <----------------------------------------------------rJMFF051L09 42 ---------------------------------------------------------------------------->JMSF043B03 <---------------------------------------------------------------------------rJMSF043B03 68 ------------------------------------------------------------------------------->JMFF042L20 <-----------------------------------------------rJMFF042L20 71 ------------------------------------------------------------------------------>JMFF042I20 <---------------------------------------------------------------------------rJMFF042I20 90 -------------------------------------------------------------------------------->JMSF036J02 <-----------------------------------------------------------------------rJMSF036J02 99 --------------------------------------------------------------->JMFF028M14 <---------------------------------------------------------------------------rJMFF028M14 116 ------------------------------------------------------------------------------------>JMSF053A13 <-------------------------------------------------------------------------------------rJMSF053A13 141 ---------------------------------------------------------------------------------------->JMSF032B19 <---------------------------------------------------------------------------------rJMSF032B19
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------>JMFN012H23-