| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028M14 | Sequence | 510 | 005256 (17) | ref|XP_009625574.1| | 5e-54 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 647 | 005256 (17) | ref|XP_010270375.1| | 1e-56 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Nelumbo |
| JMFF042I20 | Sequence | 630 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 648 | 005256 (17) | ref|XP_009625574.1| | 6e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
| JMFF042L20 | Sequence | 645 | 005256 (17) | ref|XP_009625574.1| | 4e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 402 | 005256 (17) | ref|XP_007048403.1| | 1e-49 | Photosystem I reaction center subunit PSI [Theobroma cacao] gb|EOX92560.1| Photo |
| JMFF051L09 | Sequence | 630 | 005256 (17) | ref|XP_009625574.1| | 2e-65 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 427 | 005256 (17) | ref|XP_007048403.1| | 9e-49 | Photosystem I reaction center subunit PSI [Theobroma cacao] gb|EOX92560.1| Photo |
| JMFN012H23 | Sequence | 633 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | |||||
| JMSF032B19 | Sequence | 717 | 005256 (17) | ref|XP_009625574.1| | 8e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 658 | 005256 (17) | ref|XP_009625574.1| | 4e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
| JMSF036J02 | Sequence | 653 | 005256 (17) | ref|XP_009625574.1| | 4e-65 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 609 | 005256 (17) | ref|XP_010270375.1| | 4e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Nelumbo |
| JMSF043B03 | Sequence | 618 | 005256 (17) | ref|XP_009625574.1| | 3e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 613 | 005256 (17) | ref|XP_009374210.1| | 4e-55 | PREDICTED: photosystem I reaction center subunit N, chloroplastic-like [Pyrus x |
| JMSF053A13 | Sequence | 680 | 005256 (17) | ref|XP_009625574.1| | 5e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to | 685 | 005256 (17) | ref|XP_009625574.1| | 6e-66 | PREDICTED: photosystem I reaction center subunit N, chloroplastic [Nicotiana to |
This contig is upended
. : . : . : . : . : . :
rJMFF051L09- ACCCTGGAGAGTTTTTTTTTTTT
____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTT
. : . : . : . : . : . :
rJMFF051L09- TTTTGGTTTTTTTTTTTTTTGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
rJMSF036J02- TATTGAAGGAGAAAGCA
rJMFF042L20- TGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
rJMFF042I20- TGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
rJMFF028M14- TGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
rJMSF043B03- TGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
JMSF032B19+ TTGAAGGAGAAAGCA
____________________________________________________________
consensus TTTTGGTTTTTTTTTTTTTTGCGTAGGATGAGAGGTTGCAAAGTATTGAAGGAGAAAGCA
. : . : . : . : . : . :
rJMFF051L09- GTAGAGATAATACCTGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCACTCAAT
rJMSF036J02- GTAGAGATAATACATGGCAAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
rJMFF042L20- GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
rJMFF042I20- GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
rJMFF028M14- GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
rJMSF043B03- GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
JMSF032B19+ GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
JMSF053A13+ TGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
rJMSF032B19- AGTTCAATCTAAAAAGAGCATTCAAT
JMSF036J02+ CTAAAAAGAGCATTCAAT
JMFF042L20+ GAGCATTCAAT
JMFN012H23+ TCTAAAAAGAGCATTCAAT
rJMSF053A13- ATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
____________________________________________________________
consensus GTAGAGATAATACATGG-AAGAAGAAGAGATACAAGTTCAATCTAAAAAGAGCATTCAAT
. : . : . : . : . : . :
rJMFF051L09- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMSF036J02- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMFF042L20- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMFF042I20- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMFF028M14- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMSF043B03- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMSF032B19+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMSF053A13+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMSF032B19- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMSF036J02+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMFF042L20+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMFN012H23+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMFF042I20+ AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMFF051L09+ AATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
rJMSF053A13- AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
JMSF043B03+ ACATTTCACCATTTCCAGA
____________________________________________________________
consensus AATTAATTAGGCATGAATGAAATGAGCGGTCTCACAGTCCCACATTTCACCATTTCCAGA
. : . : . : . : . : . :
rJMFF051L09- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMSF036J02- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMFF042L20- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMFF042I20- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMFF028M14- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMSF043B03- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMSF032B19+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMSF053A13+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
rJMSF032B19- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMSF036J02+ AAACATNGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMFF042L20+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMFN012H23+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMFF042I20+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMFF051L09+ AAACATTGGAACCACACTNGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMFF028M14+ CCTTCGCATTCTAATTCCAGGTCATCTG
rJMSF053A13- AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
JMSF043B03+ AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
____________________________________________________________
consensus AAACATTGGAACCACACTTGTATTTGTCCTTCCCTTCGCATTCTAATTCCAGGTCATCTG
. : . : . : . : . : . :
rJMFF051L09- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMSF036J02- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMFF042L20- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMFF042I20- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMFF028M14- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMSF043B03- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMSF032B19+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMSF053A13+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMSF032B19- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMSF036J02+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMFF042L20+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMFN012H23+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMFF042I20+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMFF051L09+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMFF028M14+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
rJMSF053A13- AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
JMSF043B03+ AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
____________________________________________________________
consensus AGATGAATGGCACTTTCTTTTGCTTGGCAAGGTCTTGACAGCCGGTGAAGTTTTCAGGGA
. : . : . : . : . : . :
rJMFF051L09- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMSF036J02- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMFF042L20- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMFF042I20- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMFF028M14- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMSF043B03- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMSF032B19+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMSF053A13+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMSF032B19- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMSF036J02+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMFF042L20+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMFN012H23+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMFF042I20+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMFF051L09+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMFF028M14+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
rJMSF053A13- ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
JMSF043B03+ ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
____________________________________________________________
consensus ACTTGCAGCTCCCAAATTGAACTGTGTATGCTCTTGCAAAGTTTGCTCCACTTGTTGCCA
. : . : . : . : . : . :
rJMFF051L09- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGA
rJMSF036J02- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
rJMFF042L20- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGA
rJMFF042I20- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
rJMFF028M14- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
rJMSF043B03- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMSF032B19+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMSF053A13+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
rJMSF032B19- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMSF036J02+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMFF042L20+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMFN012H23+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMFF042I20+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMFF051L09+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMFF028M14+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
rJMSF053A13- GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
JMSF043B03+ GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
____________________________________________________________
consensus GCCTCTTCTTGTCATTCAACTCCTTGTTGGCCTTGCTTTTCTCGAGATAGTCCTCAATGA
. : . : . : . : . : . :
rJMSF036J02- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
rJMFF042I20- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
rJMFF028M14- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
rJMSF043B03- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMSF032B19+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMSF053A13+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
rJMSF032B19- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMSF036J02+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMFF042L20+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMFN012H23+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMFF042I20+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMFF051L09+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMFF028M14+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
rJMSF053A13- CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
JMSF043B03+ CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
____________________________________________________________
consensus CGCCAGCGTTTGCTGAGGAAGTGGATGCTGCGGCGGTGAAAAGGGCAGTTGCGAGGCCGA
. : . : . : . : . : . :
rJMSF036J02- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
rJMFF042I20- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
rJMFF028M14- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
rJMSF043B03- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMSF032B19+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMSF053A13+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
rJMSF032B19- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMSF036J02+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMFF042L20+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMFN012H23+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMFF042I20+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMFF051L09+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMFF028M14+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
rJMSF053A13- GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
JMSF043B03+ GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
____________________________________________________________
consensus GAAGGGCAGCTCTTCTCCCTTGCTGGCTGCCGTTTTCGGAATCCAAAGCTGTTCTTGGTG
. : . : . : . : . : . :
rJMSF036J02- GTGGTTGTTGTTGGGCCTTGATTGCCANCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
rJMFF042I20- GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
rJMFF028M14- GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCATGGGATGCC
rJMSF043B03- GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMSF032B19+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMSF053A13+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
rJMSF032B19- GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMSF036J02+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMFF042L20+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMFN012H23+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMFF042I20+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMFF051L09+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMFF028M14+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
rJMSF053A13- GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
JMSF043B03+ GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
____________________________________________________________
consensus GTGGTTGTTGTTGGGCCTTGATTGCCAGCAGCTTTGAAGGGGGTGAGACCAT-GGATGCC
. : . : . : . : . : . :
rJMSF036J02- GACATTGAAGCAGCCTTT
rJMFF042I20- GACATTGAAGCAGCCTTTGCATTGAGCTC
rJMFF028M14- GACATTGAAGCAGCCTTTGCATTGAGCTCA
rJMSF043B03- GACATTGAANCAGCCNTTGCATTGAGCTCA
JMSF032B19+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMSF053A13+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
rJMSF032B19- GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMSF036J02+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMFF042L20+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMFN012H23+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMFF042I20+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMFF051L09+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMFF028M14+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
rJMSF053A13- GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
JMSF043B03+ GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
____________________________________________________________
consensus GACATTGAAGCAGCCTTTGCATTGAGCTCAGATGAAGCAGCCCCTGATATGGCATAGCTG
. : . : . : . : . : . :
JMSF032B19+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMSF053A13+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
rJMSF032B19- CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMSF036J02+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMFF042L20+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMFN012H23+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMFF042I20+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMFF051L09+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMFF028M14+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
rJMSF053A13- CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
JMSF043B03+ CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
____________________________________________________________
consensus CATGCCAATACACTGGAGTTCATGGCAGCCATTATCACTATAGATCGAGAAAGCTAGATT
. : . : . : . : . : . :
JMSF032B19+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTC
JMSF053A13+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTC
rJMSF032B19- GATGAGAAATTTTGGTTTTCTTTTTATTTATTG
JMSF036J02+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTC
JMFF042L20+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGT
JMFN012H23+ GATGAGAAATTTTGG
JMFF042I20+ GATGAGAAATTTTGGTTTTCTTTTTATTTAT
JMFF051L09+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGT
JMFF028M14+ GAT
rJMSF053A13- GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTC
JMSF043B03+ GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTATTTTAATTTTTGGGTTTATGATTC
____________________________________________________________
consensus GATGAGAAATTTTGGTTTTCTTTTTATTTATTGTTCTTTTAATTTTTGGGTTTATGATTC