List of clones in pair P012149.

clone	seq.	5'-sequence					3'-sequence
clone	seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFF033O08	Sequence	147	001387 (33)				596	001387 (33)	gb\|ACB05671.1\|	7e-52	chloroplast ferredoxin [Capsicum annuum]
JMFN001H04	Sequence	527	001387 (33)	gb\|ACB05671.1\|	3e-52	chloroplast ferredoxin [Capsicum annuum]
JMFN004C02	Sequence	596	001387 (33)	gb\|ACB05671.1\|	7e-52	chloroplast ferredoxin [Capsicum annuum]
JMFN017C04	Sequence	601	001387 (33)	gb\|ACB05671.1\|	5e-52	chloroplast ferredoxin [Capsicum annuum]
JMFN019E15	Sequence	599	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF004D11	Sequence	271	001387 (33)	ref\|NP_001234059.1\|	1e-22	ferredoxin-1, chloroplastic [Solanum lycopersicum] sp\|Q43517.1\|FER1_SOLLC RecNam	232	001387 (33)	pdb\|1PFD\|A	3e-21	Chain A, The Solution Structure Of High Plant Parsley [2fe-2s] Ferredoxin, Nmr,
JMSF009I21	Sequence	308	001387 (33)	ref\|NP_001234059.1\|	6e-31	ferredoxin-1, chloroplastic [Solanum lycopersicum] sp\|Q43517.1\|FER1_SOLLC RecNam	572	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]
JMSF025C01	Sequence	634	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]
JMSF027D20	Sequence	637	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	587	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF030B03	Sequence	626	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	585	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF034F01	Sequence	637	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	584	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF037B16	Sequence	638	001387 (33)	gb\|ACB05671.1\|	2e-61	chloroplast ferredoxin [Capsicum annuum]	586	001387 (33)	gb\|ACB05671.1\|	1e-61	chloroplast ferredoxin [Capsicum annuum]
JMSF038I01	Sequence	626	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	586	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF040G07	Sequence	631	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	585	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF041N23	Sequence	638	001387 (33)	gb\|ACB05671.1\|	2e-51	chloroplast ferredoxin [Capsicum annuum]	587	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]
JMSF044J20	Sequence						575	001387 (33)	gb\|ACB05671.1\|	5e-52	chloroplast ferredoxin [Capsicum annuum]
JMSF049G20	Sequence	634	001387 (33)	gb\|ACB05671.1\|	1e-51	chloroplast ferredoxin [Capsicum annuum]	587	001387 (33)	gb\|ACB05671.1\|	6e-52	chloroplast ferredoxin [Capsicum annuum]

Contig 1387 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.

SCORE============================================Contig001387============================================ 638         
  42 ---------------------->JMFF033O08                                                                                
     <--------------------------------------------------------------------------------------------rJMFF033O08  
  52 ------------------------------------------------------------------------------------------------->JMSF038I01     
     <-------------------------------------------------------------------------------------------rJMSF038I01  
  52 --------------------------------------------------------------------------------------------------->JMSF037B16   
     <-------------------------------------------------------------------------------------------rJMSF037B16  
  53 ------------------------------------------------------------------------------------------------->JMSF030B03     
     <-------------------------------------------------------------------------------------------rJMSF030B03  
  53 ------------------------------------------------------------------------------------------------->JMSF040G07     
     <-------------------------------------------------------------------------------------------rJMSF040G07  
  53 --------------------------------------------------------------------------------------------------->JMSF041N23   
     <-------------------------------------------------------------------------------------------rJMSF041N23  
  54 --------------------------------------------------------------------------------------------------->JMSF034F01   
     <-------------------------------------------------------------------------------------------rJMSF034F01  
  59 --------------------------------------------------------------------------------------------------->JMSF027D20   
     <------------------------------------------------------------------------------------------rJMSF027D20  
  60 ------------------------------------------------------------------------------------------------->JMSF049G20     
     <------------------------------------------------------------------------------------------rJMSF049G20  
  66 ----------------------------------------------->JMSF009I21                                                       
     <-----------------------------------------------------------------------------------------rJMSF009I21  
  71 ----------------------------------------->JMSF004D11                                                             
                                                          <-----------------------------------rJMSF004D11

The following clones don't have the opposite end in this pair.

     ------------------------------------------------------------------------------------------------->JMSF030C23*    
     ---------------------------------------------------------------------------------------->JMSF016J10*             
     <-----------------------------------------------------------------------------------------rJMSF011F23*           
       --------------------------------------------------------------------------------------------->JMFN017C04-      
         --------------------------------------------------------------------------------------------->JMFN019E15-    
          -------------------------------------------------------------------------------------------->JMFN004C02-    
     ------------------------------------------------------------------------------------------------>JMSF025C01-     
                                                                           <---------------rJMSF004B09*               
     <-----------------------------------------------------------------------------------------rJMSF044J20-           
      <---------------------------------------------------------------------------------------rJMSF003L10*            
          ---------------------------------------------------------------------------------->JMFN001H04-