| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033O08 | Sequence | 147 | 001387 (33) | 596 | 001387 (33) | gb|ACB05671.1| | 7e-52 | chloroplast ferredoxin [Capsicum annuum] | |||
| JMFN001H04 | Sequence | 527 | 001387 (33) | gb|ACB05671.1| | 3e-52 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMFN004C02 | Sequence | 596 | 001387 (33) | gb|ACB05671.1| | 7e-52 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMFN017C04 | Sequence | 601 | 001387 (33) | gb|ACB05671.1| | 5e-52 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMFN019E15 | Sequence | 599 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMSF003L10 | Sequence | 425 | 013124 (10) | ref|XP_009619991.1| | 3e-50 | PREDICTED: glutaredoxin-C4 [Nicotiana tomentosiformis] | 561 | 001387 (33) | gb|ACB05671.1| | 5e-51 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF004B09 | Sequence | 213 | 013337 (14) | gb|AFW89326.1| | 6e-05 | hypothetical protein ZEAMMB73_166147 [Zea mays] | 122 | 001387 (33) | |||
| JMSF004D11 | Sequence | 271 | 001387 (33) | ref|NP_001234059.1| | 1e-22 | ferredoxin-1, chloroplastic [Solanum lycopersicum] sp|Q43517.1|FER1_SOLLC RecNam | 232 | 001387 (33) | pdb|1PFD|A | 3e-21 | Chain A, The Solution Structure Of High Plant Parsley [2fe-2s] Ferredoxin, Nmr, |
| JMSF009I21 | Sequence | 308 | 001387 (33) | ref|NP_001234059.1| | 6e-31 | ferredoxin-1, chloroplastic [Solanum lycopersicum] sp|Q43517.1|FER1_SOLLC RecNam | 572 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF011F23 | Sequence | 405 | 013275 (4) | ref|XP_011083370.1| | 2e-55 | PREDICTED: histone deacetylase 19 [Sesamum indicum] ref|XP_011083371.1| PREDICTE | 582 | 001387 (33) | gb|ACB05671.1| | 5e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF016J10 | Sequence | 574 | 001387 (33) | gb|ACB05671.1| | 1e-36 | chloroplast ferredoxin [Capsicum annuum] | 725 | 001332 (2) | ref|XP_009606746.1| | 8e-98 | PREDICTED: alcohol dehydrogenase-like 4 [Nicotiana tomentosiformis] |
| JMSF025C01 | Sequence | 634 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMSF027D20 | Sequence | 637 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 587 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF030B03 | Sequence | 626 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 585 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF030C23 | Sequence | 627 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 579 | 012658 (2) | gb|ADV02768.1| | 3e-14 | putative low temperature and salt responsive protein isoform 1 [Ipomoea batatas |
| JMSF034F01 | Sequence | 637 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 584 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF037B16 | Sequence | 638 | 001387 (33) | gb|ACB05671.1| | 2e-61 | chloroplast ferredoxin [Capsicum annuum] | 586 | 001387 (33) | gb|ACB05671.1| | 1e-61 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF038I01 | Sequence | 626 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 586 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF040G07 | Sequence | 631 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 585 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF041N23 | Sequence | 638 | 001387 (33) | gb|ACB05671.1| | 2e-51 | chloroplast ferredoxin [Capsicum annuum] | 587 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] |
| JMSF044J20 | Sequence | 575 | 001387 (33) | gb|ACB05671.1| | 5e-52 | chloroplast ferredoxin [Capsicum annuum] | |||||
| JMSF049G20 | Sequence | 634 | 001387 (33) | gb|ACB05671.1| | 1e-51 | chloroplast ferredoxin [Capsicum annuum] | 587 | 001387 (33) | gb|ACB05671.1| | 6e-52 | chloroplast ferredoxin [Capsicum annuum] |
This contig is upended
. : . : . : . : . : . :
JMSF041N23+ TTTTTTTTTGGGTGCAAAACTTAACAACATTTCATAT
JMSF037B16+ TTTTTTTTTTGGGTGCAAAACTTAACAACATTTCATAT
JMSF034F01+ TTTTTTTTTTGGTGCAAAACTTAACAACATTTCATAT
JMSF030B03+ GTGCAAAACTTAACAACATTTCATAT
JMSF049G20+ TGCAAAACTTAACAACATTTCATAT
JMSF040G07+ GGTGCAAAACTTAACAACATTTCATAT
JMSF030C23+ TGCAAAACTTAACAACATTTCATAT
JMFN004C02+ GGTGCAAAACTTAACAACATTTCATAT
JMSF027D20+ TTTTTTTTTTGGTGCAAAACTTAACAACATTTCATAT
JMSF025C01+ AAAACTTAACAACATTTCATAT
JMFN017C04+ CAACATTTCATAT
JMFN019E15+ CAAAACTTAACAACATTTCATAT
JMSF038I01+ GCAAAACTTAACAACATTTCATAT
____________________________________________________________
consensus TTTTTTTTTTTGGTGCAAAACTTAACAACATTTCATAT
. : . : . : . : . : . :
JMSF041N23+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF041N23- TAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF009I21- TAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF037B16+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF034F01+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF030B03+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF049G20+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF040G07+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF030C23+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMFN004C02+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF027D20+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF025C01+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMFN017C04+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMFN019E15+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMFF033O08- ATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF038I01+ TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF037B16- AGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF030B03- GAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF040G07- GAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF034F01- AGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
JMSF016J10+ TATGGAAGAACTAAAACTCCATTGTTG
rJMSF038I01- AGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF049G20- TACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF011F23- CAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF044J20- AGATAATGTATGGAAGAACTAAAACTCCATTGTTG
rJMSF003L10- ATGGAAGAACTAAAACTCCATTGTTG
JMFN001H04+ AACTAAAACTCCATTGTTG
rJMSF004D11- TATGGAAGAACNAANACTCCATTGTTG
rJMSF004B09- TGTTG
rJMSF027D20- GTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
____________________________________________________________
consensus TAAATTGTAAATATAGAGCAAGTACAGATAATGTATGGAAGAACTAAAACTCCATTGTTG
. : . : . : . : . : . :
JMSF041N23+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF041N23- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF009I21- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF037B16+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF034F01+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF030B03+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF049G20+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF040G07+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATAGATTAGA
JMSF030C23+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMFN004C02+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF027D20+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF025C01+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMFN017C04+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMFN019E15+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMFF033O08- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF038I01+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF037B16- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF030B03- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF040G07- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATAGATTAGA
rJMSF034F01- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMSF016J10+ TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF038I01- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF049G20- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF011F23- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF044J20- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF003L10- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
JMFN001H04+ TGGACAGGAAAATTCCAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF004D11- TGGACAGGAAAATTACAGAATAATTAAATATATAATANATAAATACACTTATCGATTAGA
rJMSF004B09- TGGACAGGAAAATTACAGAATAGTTAAATATATAATAAATAAATACACTTATCGATTAGA
rJMSF027D20- TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
____________________________________________________________
consensus TGGACAGGAAAATTACAGAATAATTAAATATATAATAAATAAATACACTTATCGATTAGA
. : . : . : . : . : . :
JMSF041N23+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF041N23- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF009I21- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF037B16+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF034F01+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF030B03+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF049G20+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF040G07+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF030C23+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMFN004C02+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF027D20+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF025C01+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMFN017C04+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMFN019E15+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMFF033O08- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF038I01+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF037B16- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF030B03- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF040G07- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF034F01- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMSF016J10+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF038I01- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF049G20- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF011F23- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF044J20- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF003L10- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
JMFN001H04+ CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF004D11- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
rJMSF004B09- CAATCTCTTCTTCCTTGTGGGTCTCAATGACGACGTT
rJMSF027D20- CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
____________________________________________________________
consensus CAATCTCTTCTTCCTTGTGGGTCTCAATGACAACGTTAGACGTAGGGTAAGCGACGCAGG
. : . : . : . : . : . :
JMSF041N23+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF041N23- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF009I21- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF037B16+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF034F01+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF030B03+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF049G20+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF040G07+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF030C23+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMFN004C02+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF027D20+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF025C01+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMFN017C04+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMFN019E15+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMFF033O08- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF038I01+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF037B16- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF030B03- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF040G07- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF034F01- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMSF016J10+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF038I01- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF049G20- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF011F23- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF044J20- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF003L10- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
JMFN001H04+ TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF004D11- TGAGGACGTANCCGGCGTCCATCTGCTCGTCCTCNAGGAAGCTGTTGTCGGACTGGTCGA
rJMSF027D20- TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
____________________________________________________________
consensus TGAGGACGTAGCCGGCGTCCATCTGCTCGTCGTCGAGGAAGCTGTTGTCGGACTGGTCGA
. : . : . : . : . : . :
JMSF041N23+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF041N23- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF009I21- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF037B16+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGTACGAGTACG
JMSF034F01+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF030B03+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF049G20+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF040G07+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF030C23+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMFN004C02+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF027D20+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF025C01+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMFN017C04+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMFN019E15+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMFF033O08- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF038I01+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF037B16- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGTACGAGTACG
rJMSF030B03- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF040G07- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF034F01- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF016J10+ CGGTGCCGGAGA-CACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMSF009I21+ CGAGTACG
rJMSF038I01- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF049G20- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF011F23- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF044J20- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF003L10- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
JMFN001H04+ CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
rJMSF004D11- CGGTGCCGGANACCACCTTGCCGGC
rJMSF027D20- CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
____________________________________________________________
consensus CGGTGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCACGAGTACG
. : . : . : . : . : . :
JMSF041N23+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF041N23- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF009I21- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF004D11+ TCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF037B16+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF034F01+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF030B03+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF049G20+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF040G07+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF030C23+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMFN004C02+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF027D20+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF025C01+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMFN017C04+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMFN019E15+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMFF033O08- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF038I01+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF037B16- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF030B03- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF040G07- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF034F01- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF016J10+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMSF009I21+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF038I01- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF049G20- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF011F23- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF044J20- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF003L10- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
JMFN001H04+ GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
rJMSF027D20- GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
____________________________________________________________
consensus GGAGATCGGCCCCCAATTCCTCCGCCTGGTCCAGAACGTAAACGTCGTCGGGGCAATCGA
. : . : . : . : . : . :
JMSF041N23+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF041N23- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF009I21- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF004D11+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF037B16+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF034F01+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF030B03+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF049G20+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF040G07+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF030C23+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMFN004C02+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF027D20+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF025C01+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMFN017C04+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMFN019E15+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMFF033O08- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF038I01+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF037B16- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF030B03- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF040G07- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF034F01- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF016J10+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMSF009I21+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF038I01- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF049G20- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF011F23- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF044J20- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF003L10- ACTCTAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
JMFN001H04+ ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
rJMSF027D20- ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
____________________________________________________________
consensus ACTCGAAGTCCCCTGTCGGGGTCACCAGTTTCACCTTGTAAGACGCCATGCAGGTCATCC
. : . : . : . : . : . :
JMSF041N23+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF041N23- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF009I21- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF004D11+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF037B16+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF034F01+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF030B03+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF049G20+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF040G07+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF030C23+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMFN004C02+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF027D20+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF025C01+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMFN017C04+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMFN019E15+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMFF033O08- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMFF033O08+ GCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF038I01+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF037B16- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF030B03- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF040G07- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF034F01- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF016J10+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMSF009I21+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF038I01- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF049G20- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF011F23- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF044J20- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF003L10- GCCCCATGTTGCCGGATTTCAGCCCCNACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
JMFN001H04+ GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
rJMSF027D20- GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
____________________________________________________________
consensus GCCCCATGTTGCCGGATTTCAGCCCCAACTGCGCCGGCCGGAAGTTCGAGATGGCCCTCA
. : . : . : . : . : . :
JMSF041N23+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF041N23- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF009I21- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF004D11+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF037B16+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF034F01+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF030B03+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF049G20+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF040G07+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF030C23+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMFN004C02+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF027D20+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF025C01+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMFN017C04+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMFN019E15+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMFF033O08- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMFF033O08+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF038I01+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF037B16- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF030B03- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF040G07- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF034F01- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF016J10+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMSF009I21+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF038I01- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF049G20- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF011F23- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF044J20- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF003L10- NGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
JMFN001H04+ GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
rJMSF027D20- GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
____________________________________________________________
consensus GGCTGCCGCCCGCCGCCGCCGGCTTCCCGGACAGGAAGGAGGTGCTCATCATGCTGCCTG
. : . : . : . : . : . :
JMSF041N23+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACA
rJMSF041N23- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACA
rJMSF009I21- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACATC
JMSF004D11+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACATC
JMSF037B16+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF034F01+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF030B03+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF049G20+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF040G07+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF030C23+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACT
JMFN004C02+ CGGAGAGAGTCGCCATTTTTTTCTTTTTC
JMSF027D20+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF025C01+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMFN017C04+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAG
JMFN019E15+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTT
rJMFF033O08- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTT
JMFF033O08+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTT
JMSF038I01+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF037B16- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF030B03- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF040G07- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF034F01- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
JMSF016J10+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACATC
JMSF009I21+ CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACATC
rJMSF038I01- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF049G20- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
rJMSF011F23- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTT
rJMSF044J20- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACT
rJMSF003L10- CNGANAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCA
JMFN001H04+ CGGAGAGAGTCGCCATTTTTTTCTTTTT
rJMSF027D20- CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC
____________________________________________________________
consensus CGGAGAGAGTCGCCATTTTTTTCTTTTTCGATTCTTGGGTTAGTTGAGAATGGCAACTTC