clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF005I16 | Sequence | 378 | 006490 (10) | emb|CDP01952.1| | 2e-11 | unnamed protein product [Coffea canephora] | 367 | 006490 (10) | gb|AIA08937.1| | 3e-40 | green-ripe like protein 2 [Petunia x hybrida] |
JMSF006N24 | Sequence | 310 | 006490 (10) | 319 | 006490 (10) | gb|AIA08937.1| | 2e-40 | green-ripe like protein 2 [Petunia x hybrida] | |||
JMSF016I16 | Sequence | 509 | 006490 (10) | emb|CDP01952.1| | 2e-39 | unnamed protein product [Coffea canephora] | 746 | 006490 (10) | emb|CDP01952.1| | 3e-115 | unnamed protein product [Coffea canephora] |
JMSF019P04 | Sequence | 451 | 006490 (10) | emb|CDP01952.1| | 7e-28 | unnamed protein product [Coffea canephora] | 752 | 006490 (10) | emb|CDP01952.1| | 5e-113 | unnamed protein product [Coffea canephora] |
JMSF028L21 | Sequence | 666 | 006490 (10) | emb|CDP01952.1| | 1e-61 | unnamed protein product [Coffea canephora] | 730 | 006490 (10) | emb|CDP01952.1| | 2e-114 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006490============================================1028 5 ------------------------------------>JMSF005I16 <----------------------------------rJMSF005I16 46 ------------------------------------------->JMSF019P04 <------------------------------------------------------------------------rJMSF019P04 49 ------------------------------------------------>JMSF016I16 <------------------------------------------------------------------------rJMSF016I16 49 ---------------------------------------------------------------->JMSF028L21 <----------------------------------------------------------------------rJMSF028L21 61 ----------------------------->JMSF006N24 <-----------------------------rJMSF006N24
The following clones don't have the opposite end in this pair.