clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF049F14 | Sequence | 636 | 000735 (9) | emb|CAJ77501.1| | 1e-102 | expp1 protein precursor [Solanum tuberosum] | 559 | 000735 (9) | emb|CDP10582.1| | 4e-80 | unnamed protein product [Coffea canephora] |
JMFN004N04 | Sequence | 639 | 000735 (9) | emb|CAJ77501.1| | 2e-100 | expp1 protein precursor [Solanum tuberosum] | |||||
JMFN036M08 | Sequence | 622 | 000735 (9) | emb|CDP10582.1| | 1e-87 | unnamed protein product [Coffea canephora] | |||||
JMSF021O02 | Sequence | 665 | 000735 (9) | emb|CAJ77501.1| | 2e-107 | expp1 protein precursor [Solanum tuberosum] | 670 | 000735 (9) | emb|CAJ77501.1| | 2e-105 | expp1 protein precursor [Solanum tuberosum] |
JMSF021P02 | Sequence | 670 | 000735 (9) | emb|CAJ77501.1| | 1e-109 | expp1 protein precursor [Solanum tuberosum] | 720 | 000735 (9) | emb|CAJ77501.1| | 1e-107 | expp1 protein precursor [Solanum tuberosum] |
JMSF022P02 | Sequence | 675 | 000735 (9) | emb|CAJ77501.1| | 4e-111 | expp1 protein precursor [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000735============================================ 928 29 -------------------------------------------------------------------->JMFF049F14 <-----------------------------------------------------------rJMFF049F14 43 ----------------------------------------------------------------------->JMSF021O02 <-----------------------------------------------------------------------rJMSF021O02 44 ----------------------------------------------------------------------->JMSF021P02 <----------------------------------------------------------------------------rJMSF021P02
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------>JMSF022P02- ------------------------------------------------------------------>JMFN036M08- -------------------------------------------------------------------->JMFN004N04-