| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF049F14 | Sequence | 636 | 000735 (9) | emb|CAJ77501.1| | 1e-102 | expp1 protein precursor [Solanum tuberosum] | 559 | 000735 (9) | emb|CDP10582.1| | 4e-80 | unnamed protein product [Coffea canephora] |
| JMFN004N04 | Sequence | 639 | 000735 (9) | emb|CAJ77501.1| | 2e-100 | expp1 protein precursor [Solanum tuberosum] | |||||
| JMFN036M08 | Sequence | 622 | 000735 (9) | emb|CDP10582.1| | 1e-87 | unnamed protein product [Coffea canephora] | |||||
| JMSF021O02 | Sequence | 665 | 000735 (9) | emb|CAJ77501.1| | 2e-107 | expp1 protein precursor [Solanum tuberosum] | 670 | 000735 (9) | emb|CAJ77501.1| | 2e-105 | expp1 protein precursor [Solanum tuberosum] |
| JMSF021P02 | Sequence | 670 | 000735 (9) | emb|CAJ77501.1| | 1e-109 | expp1 protein precursor [Solanum tuberosum] | 720 | 000735 (9) | emb|CAJ77501.1| | 1e-107 | expp1 protein precursor [Solanum tuberosum] |
| JMSF022P02 | Sequence | 675 | 000735 (9) | emb|CAJ77501.1| | 4e-111 | expp1 protein precursor [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF049F14- AAT
JMFN036M08+ GAGAGAGAAAAAAACATCTTTCCACAAT
____________________________________________________________
consensus GAGAGAGAAAAAAACATCTTTCCACAAT
. : . : . : . : . : . :
rJMFF049F14- CCACACAGAGGTTTAATAGTTTGAAGAAAGTAAGAGATTTACATATTTTTGCATACAAAC
JMFN036M08+ CCACACAGAGGTTTAATAGTTTGAAGAAAGTAAGAGATTTACATATTTTTGCATACAAAC
rJMSF021O02- ATAGTTTGAAGAAAGTAAGAGATTTACATATTTTTGCATACAAAC
rJMSF021P02- ATAGTTTGAAGAAAGTAAGAGATTTACATATTTTTGCATACAAAC
____________________________________________________________
consensus CCACACAGAGGTTTAATAGTTTGAAGAAAGTAAGAGATTTACATATTTTTGCATACAAAC
. : . : . : . : . : . :
rJMFF049F14- GAAGGACCAGAGTGTATAGAAATAATGAAGGATGTTTAAGAATTTGTTCACCGATTCTAT
JMFN036M08+ GAAGGACCAGAGTGTATAGAAATAATGAAGGATGTTTAAGAATTTGTTCACCGATTCTAT
rJMSF021O02- GAAGGACCAGAGTGTATAGAAATAATGAAGGATGTTTAAGAATTTGTTCACCGATTCTAT
rJMSF021P02- GAAGGACCAGAGTGTATAGAAATAATGAAGGATGTTTAAGAATTTGTTCACCGATTCTAT
____________________________________________________________
consensus GAAGGACCAGAGTGTATAGAAATAATGAAGGATGTTTAAGAATTTGTTCACCGATTCTAT
. : . : . : . : . : . :
rJMFF049F14- CCACATGTGGGAATAAAACACAGATTAGAAGAATTTGTTGTACTGACTGGTGAGGGAATC
JMFN036M08+ CCACATGTGGGAATAAAACACAGATTAGAAGAATTTGTTGTACTGACTGGTGAGGGAATC
rJMSF021O02- CCACATGTGGGAATAAAACACAGATTAGAAGAATTTGTTGTACTGACTGGTGAGGGAATC
rJMSF021P02- CCACATGTGGGAATAAAACACAGATTAGAAGAATTTGTTGTACTGACTGGTGAGGGAATC
____________________________________________________________
consensus CCACATGTGGGAATAAAACACAGATTAGAAGAATTTGTTGTACTGACTGGTGAGGGAATC
. : . : . : . : . : . :
rJMFF049F14- CTTGAGATTAGAATAGACGCTATAAAGGGAGTACTGCCGGAGGTTCTTCACTTCATACCA
JMFN036M08+ CTTGAGATTAGAATAGACGCTATAAAGGGAGTACTGCCGGAGGTTCTTCACTTCATACCA
rJMSF021O02- CTTGAGATTAGAATAGACGCTATAAAGGGAGTACTGCCGGAGGTTCTTCACTTCATACCA
rJMSF021P02- CTTGAGATTAGAATAGACGCTATAAAGGGAGTACTGCCGGAGGTTCTTCACTTCATACCA
JMSF021P02+ CTTCATACCA
JMSF022P02+ CTTCACTTCATACCA
JMSF021O02+ TACCA
____________________________________________________________
consensus CTTGAGATTAGAATAGACGCTATAAAGGGAGTACTGCCGGAGGTTCTTCACTTCATACCA
. : . : . : . : . : . :
rJMFF049F14- CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMFN036M08+ CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
rJMSF021O02- CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
rJMSF021P02- CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMSF021P02+ CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMSF022P02+ CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMFF049F14+ GCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMFN004N04+ GCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
JMSF021O02+ CGAGNTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
____________________________________________________________
consensus CGAGTTGAAAACCGACTCGTGCTTATCAGTGCCGGAGAATGTCAGTTGTATTCCAAGGCT
. : . : . : . : . : . :
rJMFF049F14- ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMFN036M08+ ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
rJMSF021O02- ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
rJMSF021P02- ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMSF021P02+ ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMSF022P02+ ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMFF049F14+ ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMFN004N04+ ACAGTCTACATTCCCACCTCGGTTCTGNCAGGAATTGGTCTTCATAGCACAATCTTGACC
JMSF021O02+ ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
____________________________________________________________
consensus ACAGTCTACATTCCCACCTCGGTTCTTGCAGGAATTGGTCTTCATAGCACAATCTTGACC
. : . : . : . : . : . :
rJMFF049F14- ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMFN036M08+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
rJMSF021O02- ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
rJMSF021P02- ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMSF021P02+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMSF022P02+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMFF049F14+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMFN004N04+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
JMSF021O02+ ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
____________________________________________________________
consensus ATTGAGGCATGTGAAGCCTGAGCTGCCTTTGCACGATGCACACCCATCCCTCTTCCAGTA
. : . : . : . : . : . :
rJMFF049F14- CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMFN036M08+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
rJMSF021O02- CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
rJMSF021P02- CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMSF021P02+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMSF022P02+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMFF049F14+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMFN004N04+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
JMSF021O02+ CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
____________________________________________________________
consensus CAGGTTTTGCAGTCTGCCCTTTTTGAATTCAAAAACCAGGGTAAAGCTTGACACGATGTA
. : . : . : . : . : . :
rJMFF049F14- ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMFN036M08+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
rJMSF021O02- ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
rJMSF021P02- ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMSF021P02+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMSF022P02+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMFF049F14+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMFN004N04+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
JMSF021O02+ ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
____________________________________________________________
consensus ACTCCCGTTAGCAACAAAAGCTGGGGGAGACCTAGCAGCATATTTCCTACCAGCAAATGC
. : . : . : . : . : . :
rJMFF049F14- CACCATATACCCTCCA
JMFN036M08+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAG
rJMSF021O02- CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
rJMSF021P02- CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
JMSF021P02+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
JMSF022P02+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
JMFF049F14+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
JMFN004N04+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
JMSF021O02+ CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
____________________________________________________________
consensus CACCATATACCCTCCAACAGAGTCCGGGAAGAAGCTGGAGGTGTTGACGGTGAGAAGCGA
. : . : . : . : . : . :
rJMSF021O02- GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
rJMSF021P02- GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
JMSF021P02+ GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
JMSF022P02+ GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
JMFF049F14+ GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
JMFN004N04+ GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
JMSF021O02+ GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
____________________________________________________________
consensus GATCTCGTCGACTTTAGGTCGGAAGACAGCGAGCTGAGCGTTGTTGAGGGAGAGGCGGCG
. : . : . : . : . : . :
rJMSF021O02- GTCGCAGGGAGACAGCTGG
rJMSF021P02- GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
JMSF021P02+ GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
JMSF022P02+ GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
JMFF049F14+ GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
JMFN004N04+ GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
JMSF021O02+ GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
____________________________________________________________
consensus GTCGCAGGGAGACAGCTGGACATCTTTGTTTTTGCTGTCGTTGATGAAGGTAGCGTTCCT
. : . : . : . : . : . :
rJMSF021P02- CGCCGCGA
JMSF021P02+ CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
JMSF022P02+ CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
JMFF049F14+ CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
JMFN004N04+ CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
JMSF021O02+ CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
____________________________________________________________
consensus CGCCGCGAATACGATTCCGAAGGTGAAGCCGTCGGACTTCTGTACCGTCGTATCGGCGCA
. : . : . : . : . : . :
JMSF021P02+ CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
JMSF022P02+ CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
JMFF049F14+ CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
JMFN004N04+ CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
JMSF021O02+ CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
____________________________________________________________
consensus CGGCGAGAACACGTGGTTCGTGTCGCTGCTCGATTCAGCCAAGAGAAAGAGAGTTGGGAA
. : . : . : . : . : . :
JMSF021P02+ GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTCAGC
JMSF022P02+ GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTCAGC
JMFF049F14+ GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTC
JMFN004N04+ GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTCAGC
JMSF021O02+ GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTCAGCC
____________________________________________________________
consensus GATCAGCAGAGAGAGAATCGCCGACGGCCTCGCCATAGTTGGTTTGATCGCCGTTCAGCC