clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF033F11 | Sequence | 553 | 007004 (8) | ref|XP_009771788.1| | 1e-79 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 482 | 007004 (8) | ref|XP_009800267.1| | 6e-17 | PREDICTED: translocon-associated protein subunit beta [Nicotiana sylvestris] |
JMFF051C04 | Sequence | 609 | 007004 (8) | ref|XP_009771788.1| | 1e-78 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 471 | 007004 (8) | ref|XP_004231750.1| | 4e-14 | PREDICTED: translocon-associated protein subunit beta [Solanum lycopersicum] |
JMSF023P03 | Sequence | 631 | 007004 (8) | ref|XP_009771788.1| | 8e-81 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 744 | 007004 (8) | ref|XP_009771788.1| | 2e-74 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri |
JMSF031M02 | Sequence | 592 | 007004 (8) | ref|XP_009771788.1| | 1e-72 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 672 | 007004 (8) | emb|CDP16727.1| | 7e-57 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007004============================================ 923 8 ----------------------------------------------------------------->JMFF051C04 <--------------------------------------------------rJMFF051C04 17 ------------------------------------------------------------------->JMSF023P03 <--------------------------------------------------------------------------------rJMSF023P03 22 ------------------------------------------------------------>JMSF031M02 <-----------------------------------------------------------------------rJMSF031M02 160 ----------------------------------------------------------->JMFF033F11 <------------------------------------------------rJMFF033F11
The following clones don't have the opposite end in this pair.