| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033F11 | Sequence | 553 | 007004 (8) | ref|XP_009771788.1| | 1e-79 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 482 | 007004 (8) | ref|XP_009800267.1| | 6e-17 | PREDICTED: translocon-associated protein subunit beta [Nicotiana sylvestris] |
| JMFF051C04 | Sequence | 609 | 007004 (8) | ref|XP_009771788.1| | 1e-78 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 471 | 007004 (8) | ref|XP_004231750.1| | 4e-14 | PREDICTED: translocon-associated protein subunit beta [Solanum lycopersicum] |
| JMSF023P03 | Sequence | 631 | 007004 (8) | ref|XP_009771788.1| | 8e-81 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 744 | 007004 (8) | ref|XP_009771788.1| | 2e-74 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri |
| JMSF031M02 | Sequence | 592 | 007004 (8) | ref|XP_009771788.1| | 1e-72 | PREDICTED: translocon-associated protein subunit beta-like [Nicotiana sylvestri | 672 | 007004 (8) | emb|CDP16727.1| | 7e-57 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF051C04- ATTCTGTCAAACCTC
JMSF031M02- GTCAAACCTC
JMFF033F11- ATTCTGTCAAACCTC
JMSF023P03- GAAGACTTATTCTGTCAAACCTC
____________________________________________________________
consensus GAAGACTTATTCTGTCAAACCTC
. : . : . : . : . : . :
JMFF051C04- GCACTCTCTCTCATTACCACGTCTACTCTGAATCTGAGCTATGGCGAATTGGTCGAGGAA
JMSF031M02- GCACTCTCTCTCATTACCACGTCTACTCTGAATCTGAGCTATGGCGAATTGGTCGAGGAA
JMFF033F11- GCACTCTCTCTCATTACCACGTCTACTCTGAATCTGAGCTATGGCGAATTGGTCGAGGGA
JMSF023P03- GCACTCTCTCTCATTACCACGTCTACTCTGAATCTGAGCTATGGCGAATTGGTCGAGGAA
____________________________________________________________
consensus GCACTCTCTCTCATTACCACGTCTACTCTGAATCTGAGCTATGGCGAATTGGTCGAGGAA
. : . : . : . : . : . :
JMFF051C04- CTCTTCCCTACCTCTTCTCTTCTTCTTCTTGGTGTCATGGACTGCAGTCGCGGCCAGTTC
JMSF031M02- CTCTTCCCTACCTCTTCTCTTCTTCTTCTTGGTGTCATGGACTGCAGTCGCGGCCAGTTC
JMFF033F11- CTCTTCCCTACCTCTTCTCTTCTTCTTCTTGGTGTCATGGACTGCAGTCGCGGCCAGTTC
JMSF023P03- CTCTTCCCTACCTCTTCTCTTCTTCTTCTTGGTGTCATGGACTGCAGTCGCGGCCAGTTC
____________________________________________________________
consensus CTCTTCCCTACCTCTTCTCTTCTTCTTCTTGGTGTCATGGACTGCAGTCGCGGCCAGTTC
. : . : . : . : . : . :
JMFF051C04- CGATGGCCCCTTCATCATCGCCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
JMSF031M02- CGATGGCCCCTTCATCATCGCCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
JMFF033F11- CGATGGCCCCTTCATCATCGCCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
JMSF023P03- CGATGGCCCCTTCATCATCGCCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
rJMSF023P03+ CCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
____________________________________________________________
consensus CGATGGCCCCTTCATCATCGCCCACAAGAAGGCCACCACTACCAGGCTGAAATCCGGTTC
. : . : . : . : . : . :
JMFF051C04- CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
JMSF031M02- CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
JMFF033F11- CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
JMSF023P03- CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
rJMSF023P03+ CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
rJMSF031M02+ GCGACTGCTTATGATTT
____________________________________________________________
consensus CGAACGTGTCTCTGTCACCATCGACCTCTATAACGAAGGATCTGCGACTGCTTATGATTT
. : . : . : . : . : . :
JMFF051C04- GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
JMSF031M02- GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
JMFF033F11- GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
JMSF023P03- GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
rJMSF023P03+ GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
rJMSF031M02+ GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
____________________________________________________________
consensus GAGTCTTAACGATGATACCTGGCCCAAGAATATATTTGACATTGTCACTGGTAACACTTC
. : . : . : . : . : . :
JMFF051C04- TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
JMSF031M02- TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
JMFF033F11- TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
JMSF023P03- TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
rJMSF023P03+ TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
rJMFF033F11+ TATGTCATGGGATCGGCNTGATGTAGGNGGTGCTNTNTCACATNCCTCNGAANNGGAGGC
rJMSF031M02+ TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
____________________________________________________________
consensus TATGTCATGGGATCGGCTTGATGTAGGTGGTGCTCTATCACATTCCTTTGAATTGGAGGC
. : . : . : . : . : . :
JMFF051C04- CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
JMSF031M02- CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
JMFF033F11- CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
JMSF023P03- CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
rJMSF023P03+ CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
rJMFF033F11+ CAAAGNTAANACATCGTTNTATGGTGTACCAGCAGTCATAACCTNTNGTGTCCCCACCAA
rJMSF031M02+ CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
____________________________________________________________
consensus CAAAGCTAAAACATTGTTTTATGGTGTACCAGCAGTCATAACCTTTCGTGTCCCCACCAA
. : . : . : . : . : . :
JMFF051C04- GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
JMSF031M02- GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTANCANAGAG
JMFF033F11- GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
JMSF023P03- GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
rJMSF023P03+ GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
rJMFF033F11+ GGNTGCTNTNCAGGAGGNNTACTNTNCTCCGATNNTGCCTCTTGACTTANTAGCAGAGAG
rJMSF031M02+ GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
rJMFF051C04+ GCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
____________________________________________________________
consensus GGCTGCTCTGCAGGAGGCTTACTCTACTCCGATCTTGCCTCTTGACTTACTAGCAGAGAG
. : . : . : . : . : . :
JMFF051C04- ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
JMSF031M02- ACCTACTGAGAAGAAGTTTGACTTGGCCAANANACTTTTGGCAAAATATGGCTCCTTGGT
JMFF033F11- ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTG
JMSF023P03- ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
rJMSF023P03+ ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
rJMFF033F11+ NCNTCCTGAGAAGAAGTNNGACTTGGCCAAGAGNCTTNTGGCAAAATANGNCTCCTCGGT
rJMSF031M02+ ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
rJMFF051C04+ ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
____________________________________________________________
consensus ACCTACTGAGAAGAAGTTTGACTTGGCCAAGAGACTTTTGGCAAAATATGGCTCCTTGGT
. : . : . : . : . : . :
JMFF051C04- TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTTGCACCCCATCAAA
JMSF031M02- TTCTGTGATATCCATTG
JMSF023P03- TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTGCAACCCCATCAAAATCCGG
rJMSF023P03+ TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTGCAACCCCATCAAAATCCGG
rJMFF033F11+ TTCTGTGATATCCATCGTGGTTNTGTTTATTNACNTNATNGCANCCCCATCAAAATCCGG
rJMSF031M02+ TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTGCAACCCCATCAAAATCCGG
rJMFF051C04+ TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTGCAACCCCATCAAAATCCGG
____________________________________________________________
consensus TTCTGTGATATCCATTGTGGTTCTGTTTATTTACCTGATTGCAACCCCATCAAAATCCGG
. : . : . : . : . : . :
JMSF023P03- TGCTGCAA
rJMSF023P03+ TGCTGCAAAGAAGAAGCGCTAAATGTATGGTGCTGGTTGCTGCTCAATTTTTGGGTCAGG
rJMFF033F11+ TGNTGCAAAGAAGAAGCNGTAAATGTATGGTGNTGGTNGCTGCTCAANTNTTGGGTCAGN
rJMSF031M02+ TGCTGCAAAGAAGAAGCGCTAAATGTATGGTGCTGGTTGCTGCTCAATTTTTGGGTCAGG
rJMFF051C04+ TGCTGCAAAGAAGAAGCGCTAAATGTATGGTGCTGGTTGCTGCTCAATTTTTGGGTCAGG
____________________________________________________________
consensus TGCTGCAAAGAAGAAGCGCTAAATGTATGGTGCTGGTTGCTGCTCAATTTTTGGGTCAGG
. : . : . : . : . : . :
rJMSF023P03+ GAAGAGTCTACCAAAAAACACACTTTGGTCATCCGGAATATGCTGTCTTTATTGTCTTTC
rJMFF033F11+ GAAGAGTATNCCAAAAAACACNCNTTGGTCATCNGGAATANGNTGTCNTTATTGTCNTTC
rJMSF031M02+ GAAGAGTCTACCAAAAAACACACTTTGGTCATCCGGAATATGCTGTCTTTATTGTCTTTC
rJMFF051C04+ GAAGAGTCTACCAAAAAACACACTTTGGTCATCCGGAATATGCTGTCTTTATTGTCTTTC
____________________________________________________________
consensus GAAGAGTCTACCAAAAAACACACTTTGGTCATCCGGAATATGCTGTCTTTATTGTCTTTC
. : . : . : . : . : . :
rJMSF023P03+ AGTCATAGAGGTCATTGTAATTCATCAGTTCAGTTTTTAATTTTATAGAACAATTAAAGC
rJMFF033F11+ AGNCATAGAGGTCATCGTAATTCATCAG
rJMSF031M02+ AGTCATAGAGGTCATTGTAATTCATCAGTTCAGTTTTTAATTTTATAGAACAATTAAAGC
rJMFF051C04+ AGTCATAGAGGTCATTGTAATTCATCAGTTCAGTTTTTAATTTTATAGAACAATTAAAGC
____________________________________________________________
consensus AGTCATAGAGGTCATTGTAATTCATCAGTTCAGTTTTTAATTTTATAGAACAATTAAAGC
. : . : . : . : . : . :
rJMSF023P03+ AGTTTGACAGTAGACTAGCTTGCTTTCTCACTCCAGCCCATTCCCATCCAATGCGGCAGT
rJMSF031M02+ AGTTTGACAGTAGACTAGCTTGCTTTCTCACTCCAGCCCATTCCCATCCAATGCGGCAGT
rJMFF051C04+ AGTTTGACAGTAGACTAGCTTGCTTTCTCACTCCAGCCCATTCCCATCCAATGCGGCAGT
____________________________________________________________
consensus AGTTTGACAGTAGACTAGCTTGCTTTCTCACTCCAGCCCATTCCCATCCAATGCGGCAGT
. : . : . : . : . : . :
rJMSF023P03+ ATCATATTAGAGAACTAGAGTTTGGTGTTTGTGCCTCAAATGCT
rJMSF031M02+ ATCATATTAGAGAACTAGAGTTTGGTGTTTGTGCCTCAAATGCTACATTTT
rJMFF051C04+ ATCATATTAGAGAACTAGAGTTTGGTGTTTGTGCCTCAAATGCTACATTTTTCTTTTTCC
____________________________________________________________
consensus ATCATATTAGAGAACTAGAGTTTGGTGTTTGTGCCTCAAATGCTACATTTTTCTTTTTCC