clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014A12 | Sequence | 567 | 005029 (9) | ref|NP_001275000.1| | 3e-95 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein | 724 | 005029 (9) | ref|NP_001275000.1| | 6e-93 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
JMFF034G24 | Sequence | 530 | 005029 (9) | ref|XP_004152229.1| | 3e-86 | PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus] ref|XP_004169077.1| | |||||
JMSF004O01 | Sequence | 337 | 005029 (9) | emb|CBI39581.3| | 2e-36 | unnamed protein product [Vitis vinifera] | 402 | 005029 (9) | ref|XP_004229399.1| | 5e-29 | PREDICTED: GTP-binding protein SAR1A [Solanum lycopersicum] |
JMSF016D01 | Sequence | 392 | 005029 (9) | emb|CBI39581.3| | 1e-51 | unnamed protein product [Vitis vinifera] | 757 | 005029 (9) | ref|NP_001275000.1| | 4e-92 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
JMSF019I08 | Sequence | 280 | 005029 (9) | gb|EMT20832.1| | 4e-36 | GTP-binding protein SAR1A [Aegilops tauschii] | 738 | 005029 (9) | ref|NP_001275000.1| | 6e-105 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005029============================================ 948 1 ---------------------------------------->JMSF016D01 <-------------------------------------------------------------------------------rJMSF016D01 246 ---------------------------------->JMSF004O01 <-----------------------rJMSF004O01 246 ----------------------------------------------------------->JMFF014A12 <------------------------------------------------------rJMFF014A12 249 ---------------------------->JMSF019I08 <-----------------------------------------------------------rJMSF019I08
The following clones don't have the opposite end in this pair.
------------------------------------------------------->JMFF034G24-