| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014A12 | Sequence | 567 | 005029 (9) | ref|NP_001275000.1| | 3e-95 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein | 724 | 005029 (9) | ref|NP_001275000.1| | 6e-93 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
| JMFF034G24 | Sequence | 530 | 005029 (9) | ref|XP_004152229.1| | 3e-86 | PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus] ref|XP_004169077.1| | |||||
| JMSF004O01 | Sequence | 337 | 005029 (9) | emb|CBI39581.3| | 2e-36 | unnamed protein product [Vitis vinifera] | 402 | 005029 (9) | ref|XP_004229399.1| | 5e-29 | PREDICTED: GTP-binding protein SAR1A [Solanum lycopersicum] |
| JMSF016D01 | Sequence | 392 | 005029 (9) | emb|CBI39581.3| | 1e-51 | unnamed protein product [Vitis vinifera] | 757 | 005029 (9) | ref|NP_001275000.1| | 4e-92 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
| JMSF019I08 | Sequence | 280 | 005029 (9) | gb|EMT20832.1| | 4e-36 | GTP-binding protein SAR1A [Aegilops tauschii] | 738 | 005029 (9) | ref|NP_001275000.1| | 6e-105 | GTP-binding protein SAR1A-like [Solanum tuberosum] gb|ABA81873.1| NtSar1 protein |
This contig is upended
. : . : . : . : . : . :
rJMSF016D01- AAGCATAAAACAGTAAAGTTCCAAGTTTTACAAAAGCTAAATACTGAA
____________________________________________________________
consensus AAGCATAAAACAGTAAAGTTCCAAGTTTTACAAAAGCTAAATACTGAA
. : . : . : . : . : . :
rJMSF016D01- TCACTTCAATAAGAAATTAACAAATATTTTGGTGCCACCACCCAAACCCAATTATAACAA
____________________________________________________________
consensus TCACTTCAATAAGAAATTAACAAATATTTTGGTGCCACCACCCAAACCCAATTATAACAA
. : . : . : . : . : . :
rJMSF016D01- TTGAAGTCAAGAAGAATAAACCCCAACAACAATAACAACAACTGTGATGGAGAGAAGAAA
____________________________________________________________
consensus TTGAAGTCAAGAAGAATAAACCCCAACAACAATAACAACAACTGTGATGGAGAGAAGAAA
. : . : . : . : . : . :
rJMSF016D01- GAAGAAAGAGAGGAGCTGATAAAGATGGAGGTATCCATCCGTCTTTACTCTTATCAGTTA
____________________________________________________________
consensus GAAGAAAGAGAGGAGCTGATAAAGATGGAGGTATCCATCCGTCTTTACTCTTATCAGTTA
. : . : . : . : . : . :
rJMSF004O01- GGATAGATGTTCATTCATACATCTACTTTATATATTGAGACACCCACTTAA
rJMSF016D01- TCCCATGGCGGATAGATGTTCATTCATACATCTACTTTATATATTGAGACACCCACTTAA
rJMFF014A12- GGATAGATGTTCATTCATACATCTACTTTATATATTGAGACACCCACTTAA
rJMSF019I08- GGATAGATGTTCATTCATACATCTACTTTATATATTGAGACACCCACTTAA
____________________________________________________________
consensus TCCCATGGCGGATAGATGTTCATTCATACATCTACTTTATATATTGAGACACCCACTTAA
. : . : . : . : . : . :
rJMSF004O01- AGCCATCGCCATACCCCATTTTGCGAACAATGCTGCACATAAATACCTCTATAGGGCGGA
rJMSF016D01- AGCCATCGCCATACCCCATTTTGCGAACAATGCTGCACATAAATACCTCTATAGGGCGGA
rJMFF014A12- AGCCATCGCCATACCCCATTTTGCGAACAATGCTGCACATAAATACCTCTATAGGGCGGA
rJMSF019I08- AGCCATCGCCATACCCCATTTTGCGAACAATGCTGCACATAAATACCTCTATAGGGCGGA
____________________________________________________________
consensus AGCCATCGCCATACCCCATTTTGCGAACAATGCTGCACATAAATACCTCTATAGGGCGGA
. : . : . : . : . : . :
rJMSF004O01- CACTAGAATCTGCAAGGTTCACCTTTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
rJMSF016D01- CACTAGAATCTGCAAGGTTCACCTTTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
rJMFF014A12- CACTAGAATCTGCAAGGTTCACCTTTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
rJMSF019I08- CACTAGAATCTGCAAGGTTCACCTTTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
JMFF014A12+ TTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
____________________________________________________________
consensus CACTAGAATCTGCAAGGTTCACCTTTCCCTTGCCAGTGGTAATACCAGTCAGGCCAAGGT
. : . : . : . : . : . :
rJMSF004O01- GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATAT
rJMSF016D01- GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
rJMFF014A12- GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
rJMSF019I08- GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
JMFF014A12+ GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
JMFF034G24+ GTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
____________________________________________________________
consensus GGTAACGCAGCTCGTCTTCTGAGGCAGCATAGGGTATGTCTATCTTGTTTCCTAATATCA
. : . : . : . : . : . :
rJMSF016D01- GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
rJMFF014A12- GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
rJMSF019I08- GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
JMFF014A12+ GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
JMFF034G24+ GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
____________________________________________________________
consensus GGAAGGGAACACTGGCAAGGGCCTCGTCAGAGAGTAGTGCATCTAATTCCTTCTTAGATT
. : . : . : . : . : . :
rJMSF016D01- CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
rJMFF014A12- CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
rJMSF019I08- CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
JMFF014A12+ CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
JMFF034G24+ CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
JMSF016D01+ CACCAAGTAAACTACAGCATCAACCTNGGCAT
____________________________________________________________
consensus CTGCAAAACGTTCTTTGTCAAATGCATCCACCAAGTAAACTACAGCATCAACCTTGGCAT
. : . : . : . : . : . :
rJMSF016D01- AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
rJMFF014A12- AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
rJMSF019I08- AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
JMFF014A12+ AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
JMFF034G24+ AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
JMSF004O01+ CTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
JMSF016D01+ AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
____________________________________________________________
consensus AGTAGTCTTTCCAGACTCTGCGAGCGATCTGATGGCCTCCCAAGTCAAAAGCTTTGAACT
. : . : . : . : . : . :
rJMSF016D01- TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
rJMFF014A12- TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
rJMSF019I08- TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
JMFF014A12+ TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
JMSF019I08+ CAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
JMFF034G24+ TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
JMSF004O01+ TGA--TTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
JMSF016D01+ TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
____________________________________________________________
consensus TGATTTTGCCAATACTCAACTCCTCGGATGTAGGATACTGAGTGGGCTGGTGCTGAACTA
. : . : . : . : . : . :
rJMSF016D01- ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTC
rJMFF014A12- ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGG
rJMSF019I08- ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
JMFF014A12+ ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
JMSF019I08+ ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
JMFF034G24+ ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
JMSF004O01+ ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
JMSF016D01+ ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
____________________________________________________________
consensus ATCTCTCGTCCTTGAGCATGTGAAGAAGAGTGGTCTTGCCGGCATTGTCGAGGCCGAGGA
. : . : . : . : . : . :
rJMSF019I08- AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCC
JMFF014A12+ AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
JMSF019I08+ AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
JMFF034G24+ AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
JMSF004O01+ AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
JMSF016D01+ AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
____________________________________________________________
consensus AAAGGATCTTGGCTTCTTTCTGCCACAGACCCAGCGACGCCAAAACGCCATAGAACCAAT
. : . : . : . : . : . :
JMFF014A12+ CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
JMSF019I08+ CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
JMFF034G24+ CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
JMSF004O01+ CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
JMSF016D01+ CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
____________________________________________________________
consensus CTAGCAAAAACATCTTTTCTTGACAACCGTGGAACCCTACGCAGATCTCAACCTCTCTCG
. : . : . : . : . : . :
JMFF014A12+ AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTTGAC
JMSF019I08+ AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTT
JMFF034G24+ AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTTGAC
JMSF004O01+ AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTTGAC
JMSF016D01+ AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTTGACTGGACGGTC
____________________________________________________________
consensus AGGATTCCTCCTATTTCAGCAGATGCAGAGAGATCTGGCTCTGCTTTTGACTGGACGGTC