clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004O13 | Sequence | 604 | 002647 (13) | ref|XP_006444361.1| | 2e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 577 | 002647 (13) | ref|XP_006444361.1| | 1e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMFF011N21 | Sequence | 576 | 002647 (13) | ref|XP_006444361.1| | 3e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 645 | 002647 (13) | ref|XP_006444361.1| | 6e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMFF031C09 | Sequence | 567 | 002647 (13) | ref|XP_006444361.1| | 1e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 656 | 002647 (13) | ref|XP_006444361.1| | 4e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMFN039F18 | Sequence | 548 | 002647 (13) | ref|XP_006444361.1| | 2e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | |||||
JMSF019M05 | Sequence | 548 | 002647 (13) | ref|XP_006444361.1| | 3e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 510 | 002647 (13) | ref|XP_006444361.1| | 2e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMSF025L05 | Sequence | 579 | 002647 (13) | ref|XP_006444361.1| | 2e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 528 | 002647 (13) | ref|XP_006444361.1| | 1e-48 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002647============================================ 888 310 ------------------------------------------------------------>JMFF004O13 <----------------------------------------------------------------rJMFF004O13 361 --------------------------------------------------------------->JMSF025L05 <----------------------------------------------------------rJMSF025L05 381 ------------------------------------------------------------->JMSF019M05 <--------------------------------------------------------rJMSF019M05 470 --------------------------------------------------------------->JMFF011N21 <----------------------------------------------rJMFF011N21 470 --------------------------------------------------------------->JMFF031C09 <----------------------------------------------rJMFF031C09
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------------------------------rJMFF038B13* ------------------------------------------------------>JMFF008D06* ------------------------------------------------------------->JMFN039F18-