Contig 002647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O13Sequence604002647 (13)ref|XP_006444361.1|2e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P577002647 (13)ref|XP_006444361.1|1e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMFF008D06Sequence487002647 (13)ref|XP_006444361.1|7e-14hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P732009077 (3)ref|XP_011070396.1|7e-105PREDICTED: alcohol dehydrogenase-like 4 [Sesamum indicum]
JMFF011N21Sequence576002647 (13)ref|XP_006444361.1|3e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P645002647 (13)ref|XP_006444361.1|6e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMFF031C09Sequence567002647 (13)ref|XP_006444361.1|1e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P656002647 (13)ref|XP_006444361.1|4e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMFF038B13Sequence404008770 (52)dbj|BAJ91931.1|2e-67predicted protein [Hordeum vulgare subsp. vulgare]731002647 (13)ref|XP_006444361.1|1e-47hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMFN039F18Sequence548002647 (13)ref|XP_006444361.1|2e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMSF019M05Sequence548002647 (13)ref|XP_006444361.1|3e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P510002647 (13)ref|XP_006444361.1|2e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P
JMSF025L05Sequence579002647 (13)ref|XP_006444361.1|2e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P528002647 (13)ref|XP_006444361.1|1e-48hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P

Alignment

This contig is upended


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JMFF008D06+                       ACGATCAAGGGCTGTCCGGGGGCATAGNCCACGGCGGCTTTGCAAGTT
                      ____________________________________________________________
consensus                         ACGATCAAGGGCTGTCCGGGGGCATAGNCCACGGCGGCTTTGCAAGTT
 
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JMFF008D06+           ATAACCTTGCCGACCGTACTATCATCATCAACAGGAATATTGGAAGAACTCTTTGCAGAA
                      ____________________________________________________________
consensus             ATAACCTTGCCGACCGTACTATCATCATCAACAGGAATATTGGAAGAACTCTTTGCAGAA
 
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JMFF008D06+           TCGTTCTCCAAAGATCCCATTCTGGAACTCATCCAAACAACTGGCCTGCCTGCCTCTCTT
JMSF025L05+                                                  GGTGCAATATCTGATGATCTA
rJMFF004O13-                                                        TATCTGATGATCTA
JMFF031C09+                                                                     TA
JMFF011N21+                                                                   TCTA
JMFN039F18+                                                                  ATCTA
JMSF019M05+                                                           TCTGATGATCTA
rJMFF038B13-                                                          TCTGATGATCTA
                      ____________________________________________________________
consensus             TCGTTCTCCAAAGATCCCATTCTGGAACTCATCCAAACAGGTGGCCTATCTGATGATCTA
 
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JMFF008D06+           CT-TTAAGAATATTCACAGGCCAGTTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
JMSF025L05+           ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
rJMFF004O13-          ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACTT-GTTCAAAC
JMFF031C09+           ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
JMFF011N21+           ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
JMFN039F18+           ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
JMSF019M05+           ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
JMFF004O13+                                    TGCAACATCTGATTCAGAGAATACTT-GTTCAAAC
rJMSF025L05-                               AAGGTGCAACATCTGATTCAGAGAATACATGGTTCAAAC
rJMSF019M05-                                       ACATCTGATTCAGAGAATACAT-GTTCAAAC
rJMFF038B13-          ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
                      ____________________________________________________________
consensus             ATGAGAAGTAGAGAAAGGAAAAAGGTGCAACATCTGATTCAGAGAATACAT-GTTCAAAC
 
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JMFF008D06+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMSF025L05+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
rJMFF004O13-          ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMFF031C09+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMFF011N21+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMFN039F18+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMSF019M05+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
JMFF004O13+           ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
rJMSF025L05-          ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
rJMSF019M05-          ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
rJMFF038B13-          ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
                      ____________________________________________________________
consensus             ACAGGTAATATAATGACAGTTCAAAACTAAAAATACAATACCATCTGGAAAAAAAGAGTG
 
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JMFF008D06+           ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMSF025L05+           ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMFF004O13-          ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMFF031C09-                                      ATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMFF031C09+           ATCACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMFF011N21+           ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMFN039F18+           ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMSF019M05+           ATTACTACTCTTAATCTTCGCCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
JMFF004O13+           ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMSF025L05-          ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMSF019M05-          ATTACTACTCTTAATCTTCGCCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMFF011N21-                                      ATCATTCTCAGCAATGTTGAAGTACCTTAGTT
rJMFF038B13-          ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
                      ____________________________________________________________
consensus             ATTACTACTCTTAATCTTCGTCCTCTGCATCATTCTCAGCAATGTTGAAGTACCTTAGTT
 
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JMFF008D06+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMSF025L05+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMFF004O13-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMFF031C09-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMFF031C09+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMFF011N21+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMFN039F18+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMSF019M05+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
JMFF004O13+           CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMSF025L05-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMSF019M05-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMFF011N21-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
rJMFF038B13-          CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
                      ____________________________________________________________
consensus             CATACACACTTCTATCCTTGTTTGAAGCAATAACACGGAGCCAGTCACGCACATTGTTCT
 
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JMFF008D06+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMSF025L05+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMFF004O13-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMFF031C09-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMFF031C09+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMFF011N21+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMFN039F18+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMSF019M05+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
JMFF004O13+           TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMSF025L05-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMSF019M05-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMFF011N21-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
rJMFF038B13-          TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
                      ____________________________________________________________
consensus             TCTTTAGGTATTTCTTCGTCAAGTATTTCAAATACCTCTTGGAAAAGTTGGAATCAGAGG
 
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JMFF008D06+           TGACGGTGATCTTTGTCTTGT                                       
JMSF025L05+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMFF004O13-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMFF031C09-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
JMFF031C09+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
JMFF011N21+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
JMFN039F18+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
JMSF019M05+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
JMFF004O13+           TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMSF025L05-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMSF019M05-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMFF011N21-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
rJMFF038B13-          TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
                      ____________________________________________________________
consensus             TGACGGTGATCTTTGTCTTGTCGCGGGTGACGGTGACAGAGTCGCCGAGGGCTCCGGCCT
 
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JMSF025L05+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMFF004O13-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMFF031C09-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
JMFF031C09+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
JMFF011N21+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
JMFN039F18+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
JMSF019M05+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
JMFF004O13+           TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMSF025L05-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMSF019M05-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMFF011N21-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
rJMFF038B13-          TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
                      ____________________________________________________________
consensus             TGCCGCCGACCTTGATGCGCTCCTGCAGGAACTTCTCCAGCGATGCAATGTCCATGATCT
 
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JMSF025L05+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMFF004O13-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMFF031C09-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
JMFF031C09+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
JMFF011N21+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
JMFN039F18+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
JMSF019M05+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
JMFF004O13+           TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMSF025L05-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMSF019M05-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMFF011N21-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
rJMFF038B13-          TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
                      ____________________________________________________________
consensus             TGTCATCGACTGGCTTCGAGCAGTCGATGACGAACGTTGCGCCCTTCTTCTTCCCTCCCT
 
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JMSF025L05+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
rJMFF004O13-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
rJMFF031C09-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
JMFF031C09+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
JMFF011N21+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
JMFN039F18+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
JMSF019M05+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATT    
JMFF004O13+           TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
rJMSF025L05-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
rJMSF019M05-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATT    
rJMFF011N21-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
rJMFF038B13-          TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
                      ____________________________________________________________
consensus             TCACGACCCCACTGCTCCCTTTGCTCATCTTGACTCTTTGCCTGAACAAAGTGATTGAAG
 
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JMSF025L05+           TCGGCTGC                                                    
rJMFF004O13-          TCGGCTGCGATGGATGCTGGGAAT                                    
rJMFF031C09-          TCGGCTGCGATGGATGCTGGGAATGT                                  
JMFF031C09+           TCGGCTGCGATGGATGCTGGGAATGT                                  
JMFF011N21+           TCGGCTGCGATGGATGCTGGGAATGT                                  
JMFN039F18+           TCGG                                                        
JMFF004O13+           TCGGCTGCGATGGATGCTGGGAAT                                    
rJMSF025L05-          TCGGCTGC                                                    
rJMFF011N21-          TCGGCTGCGATGGATGCTGGGAATGT                                  
rJMFF038B13-          TCGGCTGCGATGGATGCTGGGGAGCATGCTCACGGGTCTGTCCATCCTTGGAAATACCAG
                      ____________________________________________________________
consensus             TCGGCTGCGATGGATGCTGGGAATGTTGCTCACGGGTCTGTCCATCCTTGGAAATACCAG
 
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rJMFF038B13-          CCTCAAAACCACCAGTGGTGGAGTCAATGATGAGGACAGCACAATCTGCCTGTGAGGTAC
                      ____________________________________________________________
consensus             CCTCAAAACCACCAGTGGTGGAGTCAATGATGAGGACAGCACAATCTGCCTGTGAGGTAC
 
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rJMFF038B13-          CAGTAATCATGTTTTTGATAAAGTCACGATGTCCAGGGGCATCAATGACAGTGCAGTAGT
                      ____________________________________________________________
consensus             CAGTAATCATGTTTTTGATAAAGTCACGATGTCCAGGGGCATCAATGACAGTGCAGTAGT