List of clones in pair P011840.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS056G09Sequence630000923 (9)emb|CDP17099.1|6e-119unnamed protein product [Coffea canephora]
JMSF001G19Sequence298000923 (9)ref|XP_009624281.1|1e-07PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis]716000923 (9)ref|XP_009793676.1|1e-44PREDICTED: probable polygalacturonase [Nicotiana sylvestris]
JMSF035M02Sequence698000923 (9)ref|XP_009793676.1|2e-72PREDICTED: probable polygalacturonase [Nicotiana sylvestris]641000923 (9)ref|XP_009793676.1|3e-55PREDICTED: probable polygalacturonase [Nicotiana sylvestris]
JMSF042I20Sequence736000923 (9)ref|XP_009793676.1|3e-72PREDICTED: probable polygalacturonase [Nicotiana sylvestris]747000923 (9)ref|XP_006355845.1|7e-68PREDICTED: probable polygalacturonase-like [Solanum tuberosum]
JMSF050B20Sequence691000923 (9)ref|XP_009793676.1|2e-72PREDICTED: probable polygalacturonase [Nicotiana sylvestris]756000923 (9)ref|XP_006355845.1|1e-79PREDICTED: probable polygalacturonase-like [Solanum tuberosum]

Contig 923 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000923============================================1883         
  16  --------------->JMSF001G19                                                                                      
                                                                   <-------------------------------------rJMSF001G19  
 132 -------------------------------->JMSF042I20                                                                      
                                                           <--------------------------------------rJMSF042I20  
 133 -------------------------------->JMSF035M02                                                                      
                                                                 <--------------------------------rJMSF035M02  
 133 -------------------------------->JMSF050B20                                                                      
                                                          <---------------------------------------rJMSF050B20  

The following clones don't have the opposite end in this pair.

                             --------------------------------->JMFS056G09-