clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010J02 | Sequence | 563 | 003786 (8) | ref|XP_009761469.1| | 3e-72 | PREDICTED: F-box protein PP2-A12-like [Nicotiana sylvestris] | 760 | 003786 (8) | ref|XP_011072169.1| | 7e-79 | PREDICTED: F-box protein PP2-A12 [Sesamum indicum] |
JMFF019F22 | Sequence | 563 | 003786 (8) | ref|XP_009761469.1| | 3e-72 | PREDICTED: F-box protein PP2-A12-like [Nicotiana sylvestris] | 733 | 003786 (8) | ref|XP_011072169.1| | 2e-70 | PREDICTED: F-box protein PP2-A12 [Sesamum indicum] |
JMFN005C13 | Sequence | 621 | 003786 (8) | ref|XP_009761469.1| | 3e-92 | PREDICTED: F-box protein PP2-A12-like [Nicotiana sylvestris] | |||||
JMFN045O17 | Sequence | 628 | 003786 (8) | ref|XP_009765736.1| | 1e-68 | PREDICTED: F-box protein PP2-A12-like [Nicotiana sylvestris] | |||||
JMSF036K20 | Sequence | 648 | 003786 (8) | ref|XP_009761469.1| | 1e-92 | PREDICTED: F-box protein PP2-A12-like [Nicotiana sylvestris] | 719 | 003786 (8) | emb|CDP09805.1| | 2e-90 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003786============================================1280 2 ------------------------------------------->JMFF010J02 <----------------------------------------------------------rJMFF010J02 2 ------------------------------------------->JMFF019F22 <--------------------------------------------------------rJMFF019F22 111 -------------------------------------------------->JMSF036K20 <------------------------------------------------------rJMSF036K20
The following clones don't have the opposite end in this pair.
------------------------------------------------>JMFN005C13- ---------------------------------------------->JMFN045O17-