| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF018G21 | Sequence | 500 | 002836 (9) | gb|KHG21178.1| | 1e-78 | 60S ribosomal protein L32-1 [Gossypium arboreum] | 605 | 002836 (9) | gb|KHG21178.1| | 5e-78 | 60S ribosomal protein L32-1 [Gossypium arboreum] |
| JMFF031B16 | Sequence | 657 | 002836 (9) | ref|XP_002533495.1| | 2e-54 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF28882.1| 60S riboso | 630 | 002836 (9) | ref|XP_002533495.1| | 2e-54 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF28882.1| 60S riboso |
| JMFN035E15 | Sequence | 564 | 002836 (9) | ref|XP_002519752.1| | 3e-75 | 60S ribosomal protein L32, putative [Ricinus communis] gb|EEF42725.1| 60S riboso | |||||
| JMSF019E20 | Sequence | 258 | 002836 (9) | gb|KHG21178.1| | 3e-21 | 60S ribosomal protein L32-1 [Gossypium arboreum] | 646 | 002836 (9) | gb|KHG21178.1| | 7e-79 | 60S ribosomal protein L32-1 [Gossypium arboreum] |
| JMSF024I06 | Sequence | 642 | 002836 (9) | ref|XP_006437227.1| | 6e-77 | hypothetical protein CICLE_v10032912mg [Citrus clementina] gb|ESR50467.1| hypoth | 599 | 002836 (9) | ref|XP_006437227.1| | 4e-77 | hypothetical protein CICLE_v10032912mg [Citrus clementina] gb|ESR50467.1| hypoth |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig002836============================================ 625 16 -------------------------------------------------------------------------------->JMFF018G21 <------------------------------------------------------------------------------------------------rJMFF018G21 29 ------------------------------------------------------------------------>JMSF024I06 <----------------------------------------------------------------------------------------------rJMSF024I06 71 ------------------------>JMSF019E20 <----------------------------------------------------------------------------------------rJMSF019E20 161 ------------------------------------------------------------------------>JMFF031B16 <-------------------------------------------------------------------------rJMFF031B16
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------------JMFN035E15-