clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF007A03 | Sequence | 556 | 010296 (10) | ref|XP_009804151.1| | 3e-50 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 826 | 010296 (10) | ref|XP_006366630.1| | 1e-92 | PREDICTED: polygalacturonase-like [Solanum tuberosum] |
JMFF011F06 | Sequence | 587 | 010296 (10) | ref|XP_009804151.1| | 3e-53 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 782 | 010296 (10) | ref|XP_004243884.1| | 3e-86 | PREDICTED: polygalacturonase-like [Solanum lycopersicum] |
JMFF017N02 | Sequence | 586 | 010296 (10) | ref|XP_009804151.1| | 3e-53 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 824 | 010296 (10) | ref|XP_006366630.1| | 3e-89 | PREDICTED: polygalacturonase-like [Solanum tuberosum] |
JMFF042H14 | Sequence | 631 | 010296 (10) | emb|CDP18013.1| | 1e-59 | unnamed protein product [Coffea canephora] | 499 | 010296 (10) | ref|XP_007143496.1| | 1e-31 | hypothetical protein PHAVU_007G0766000g [Phaseolus vulgaris] gb|ESW15490.1| hypo |
JMFF051N23 | Sequence | 555 | 010296 (10) | ref|XP_009599317.1| | 1e-45 | PREDICTED: polygalacturonase [Nicotiana tomentosiformis] | |||||
JMFS008D02 | Sequence | 611 | 010296 (10) | emb|CDP18013.1| | 1e-61 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010296============================================1419 1 ------------------------------------------->JMFF042H14 <----------------------------------rJMFF042H14 69 -------------------------------------->JMFF007A03 <--------------------------------------------------------rJMFF007A03 69 ---------------------------------------->JMFF011F06 <------------------------------------------------------rJMFF011F06 71 ---------------------------------------->JMFF017N02 <-------------------------------------------------------rJMFF017N02
The following clones don't have the opposite end in this pair.
<-------------------------------------rJMFF051N23- ------------------------------------------>JMFS008D02-