| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007A03 | Sequence | 556 | 010296 (10) | ref|XP_009804151.1| | 3e-50 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 826 | 010296 (10) | ref|XP_006366630.1| | 1e-92 | PREDICTED: polygalacturonase-like [Solanum tuberosum] |
| JMFF011F06 | Sequence | 587 | 010296 (10) | ref|XP_009804151.1| | 3e-53 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 782 | 010296 (10) | ref|XP_004243884.1| | 3e-86 | PREDICTED: polygalacturonase-like [Solanum lycopersicum] |
| JMFF017N02 | Sequence | 586 | 010296 (10) | ref|XP_009804151.1| | 3e-53 | PREDICTED: polygalacturonase-like [Nicotiana sylvestris] | 824 | 010296 (10) | ref|XP_006366630.1| | 3e-89 | PREDICTED: polygalacturonase-like [Solanum tuberosum] |
| JMFF042H14 | Sequence | 631 | 010296 (10) | emb|CDP18013.1| | 1e-59 | unnamed protein product [Coffea canephora] | 499 | 010296 (10) | ref|XP_007143496.1| | 1e-31 | hypothetical protein PHAVU_007G0766000g [Phaseolus vulgaris] gb|ESW15490.1| hypo |
| JMFF051N23 | Sequence | 555 | 010296 (10) | ref|XP_009599317.1| | 1e-45 | PREDICTED: polygalacturonase [Nicotiana tomentosiformis] | |||||
| JMFS008D02 | Sequence | 611 | 010296 (10) | emb|CDP18013.1| | 1e-61 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF042H14- TTTTTTTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXAGA
____________________________________________________________
consensus TTTTTTTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNAGA
. : . : . : . : . : . :
rJMFF042H14- TTGGAAGATGAATGTATAAACTTGCATTATTGTATATTCAATATCAATTAACAACAGAGA
rJMFF051N23- AATGTATAAACTTGCATTATTGTATATTCAATATCAATTAACAACAGAGA
rJMFF011F06- TTATTGTATATTCAATATCAATTAACAACAGAGA
rJMFF017N02- ATTGTATATTCAATATCAATTAACAACAGAGA
rJMFF007A03- TTATTGTATATTCAATATCAATTAACAACAGAGA
____________________________________________________________
consensus TTGGAAGATGAATGTATAAACTTGCATTATTGTATATTCAATATCAATTAACAACAGAGA
. : . : . : . : . : . :
rJMFF042H14- TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
rJMFF051N23- TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
rJMFF011F06- TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
rJMFF017N02- TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
rJMFF007A03- TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
____________________________________________________________
consensus TAAAAACACAGAAGAGCTTAGACAGCTAGAAGTATAGTAGTAGCAACATAGAATACTACT
. : . : . : . : . : . :
rJMFF042H14- AATACGGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
rJMFF051N23- AATACAGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
rJMFF011F06- AATACAGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
rJMFF017N02- AATACAGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
rJMFF007A03- AATACAGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
____________________________________________________________
consensus AATACAGGGAGTCCTAATATGGAACTCGATCTCACAAAGTTGTTCATTTGCCGCAAGCCA
. : . : . : . : . : . :
rJMFF042H14- GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
rJMFF051N23- GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
rJMFF011F06- GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
rJMFF017N02- GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
rJMFF007A03- GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
____________________________________________________________
consensus GTGGTGGAACTACCTTTCCGGTTAGCTTAGGCTTCACATTCTTACAAATAGATTTTGCAC
. : . : . : . : . : . :
rJMFF042H14- CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
rJMFF051N23- CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
rJMFF011F06- CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
rJMFF017N02- CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
rJMFF007A03- CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
____________________________________________________________
consensus CACCGCCTTTGACTGTCAAATTAATATCACCGATTTCAACTCCTTCACATGGCACCCCAC
. : . : . : . : . : . :
rJMFF042H14- TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAAAAGTACCTTTTATATTTTTATAGC
rJMFF051N23- TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAGAAGTACCTTTTATATTTTTATAGC
rJMFF011F06- TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAGAAGTACCTTTTATATTTTTATAGC
rJMFF017N02- TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAGAAGTACCTTTTATATTTTTATAGC
rJMFF007A03- TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAGAAGTACCTTTTATATTTTTATAGC
____________________________________________________________
consensus TGCTGCATGCAAGTTGCACTGCCACTGGTGTTGCAGAAGTACCTTTTATATTTTTATAGC
. : . : . : . : . : . :
rJMFF042H14- TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
rJMFF051N23- TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
rJMFF011F06- TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
rJMFF017N02- TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
rJMFF007A03- TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
____________________________________________________________
consensus TTATTTTGCTAAGCTTTACTAGTGATGGTTTCTGCTTTGAGCATTCGTTATTCGGGCAGT
. : . : . : . : . : . :
rJMFF042H14- ATTCTTGATCAATCACCATTGGGTTTTTGACATTTTGCAT
rJMFF051N23- ATTCTTGATCAATCACAATTGGGTTTTTGACATTTTGCATGTCTATATTCTNCAAATGAA
rJMFF011F06- ATTCTTGATCAATCACAATTGGGTTTTTGACATTTTGCATGTCTATATTCTCAAAATGAA
rJMFF017N02- ATTCTTGATCAATCACAATTGGGTTTTTGACATTTTGCATGTCTATATTCTCAAAATGAA
rJMFF007A03- ATTCTTGATCAATCACAATTGGGTTTTTGACATTTTGCATGTCTATATTCTCAAAATGAA
____________________________________________________________
consensus ATTCTTGATCAATCACAATTGGGTTTTTGACATTTTGCATGTCTATATTCTCAAAATGAA
. : . : . : . : . : . :
rJMFF051N23- TATCAGTTACAACTCCAGGATGAGAATTAGGCCATGTTTTAATTCTAACACCATTATCTG
rJMFF011F06- TATCAGTTACAACTCCAGGATGAGAATTAGGCCATGTTTTAATTCTAACACCATTATCTG
rJMFF017N02- TATCAGTTACAACTCCAGGATGAGAATTAGGCCATGTTTTAATTCTAACACCATTATCTG
rJMFF007A03- TATCAGTTACAACTCCAGGATGAGAATTAGGCCATGTTTTAATTCTAACACCATTATCTG
____________________________________________________________
consensus TATCAGTTACAACTCCAGGATGAGAATTAGGCCATGTTTTAATTCTAACACCATTATCTG
. : . : . : . : . : . :
rJMFF051N23- TACCAATAAATTT
rJMFF011F06- TACCAATAAATTTAGAGTTTGACACAAAGATGCCCTTCACTGGTGTTTCACCCGGACTTC
rJMFF017N02- TACCAATAAATTTAGAGTTTGACACAAAGATGCCCTTCACTGGTGTTTCACCCGGACTTC
rJMFF007A03- TACCAATAAATTTAGAGTTTGACACAAAGATGCCCTTCACTGGTGTTTCACCCGGACTTC
____________________________________________________________
consensus TACCAATAAATTTAGAGTTTGACACAAAGATGCCCTTCACTGGTGTTTCACCCGGACTTC
. : . : . : . : . : . :
rJMFF011F06- TGCCAAGGCTACCCACACTGATGCCGTGTCCAGGCCCACATGTCACACCTGTGACTTTCA
rJMFF017N02- TGCCAAGGCTACCCACACTGATGCCGTGTCCAGGCCCACATGTCACACCTGTGACTTTCA
rJMFF007A03- TGCCAAGGCTACCCACACTGATGCCGTGTCCAGGCCCACATGTCACACCTGTGACTTTCA
____________________________________________________________
consensus TGCCAAGGCTACCCACACTGATGCCGTGTCCAGGCCCACATGTCACACCTGTGACTTTCA
. : . : . : . : . : . :
rJMFF011F06- GGTTTTCTAACCCGTCCCCAAGAGATATGCAATCGTCCCCGGTTCCAATAACAGAATCTT
rJMFF017N02- GGTTTTCTAACCCGTCCCCAAGAGATATGCAATCGTCCCCGGTTCCAATAACAGAATCTT
rJMFF007A03- GGTTTTCTAACCCGTCCCCAAGAGATATGCAATCGTCCCCGGTTCCAATAACAGAATCTT
____________________________________________________________
consensus GGTTTTCTAACCCGTCCCCAAGAGATATGCAATCGTCCCCGGTTCCAATAACAGAATCTT
. : . : . : . : . : . :
rJMFF011F06- TAACTGTAACACCAATTATTTTTGCAATATGAATTCCATCTGTGTTGGGACTATTCCCTG
rJMFF017N02- TAACTGTAACACCAATTATTTTTGCAATATGAATTCCATCTGTGTTGGGACTATTCCCTG
rJMFF007A03- TAACTGTAACACCAATTATTTTTGCAATATGAATTCCATCTGTGTTGGGACTATTCCCTG
JMFS008D02+ GCAATATGAATTCCATCTGTGTTGGGACTATTCCCTG
JMFF042H14+ TGAATTCCATCTGTGTTGGGACTATTCCCTG
____________________________________________________________
consensus TAACTGTAACACCAATTATTTTTGCAATATGAATTCCATCTGTGTTGGGACTATTCCCTG
. : . : . : . : . : . :
rJMFF011F06- GGGCTTTAACGGTGAAATGATCNAACG
rJMFF017N02- GGGCTTTAACGGTGAAATGATCAAACGTTAAGTTCTTGCCACCA
rJMFF007A03- GGGCTTTAACGGTGAAATGATCAAACGTTAAGTTCTTGCCACCANGAACATTGACGTGAA
JMFS008D02+ GGGCTTTAACGGTGAAATGATCAAACGTTAAGTTCTTGCCACCAAGAACATTGACGTGAA
JMFF007A03+ ACCAAGAACATTGACGTGAA
JMFF011F06+ CGGTGAAATGATCAAACGTTAAGTTCTTGCCACCAAGAACATTGACGTGAA
JMFF017N02+ TGAAATGATCAAACGTTAAGTTCTTGCCACCAAGAACATTGACGTGAA
JMFF042H14+ GGGCTTTAACGGTGAAATGATCAAACGTTAAGTTCTTGCCACCAAGAACATTGACGTGAA
____________________________________________________________
consensus GGGCTTTAACGGTGAAATGATCAAACGTTAAGTTCTTGCCACCAAGAACATTGACGTGAA
. : . : . : . : . : . :
rJMFF007A03- A
JMFS008D02+ ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
JMFF007A03+ ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
JMFF011F06+ ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
JMFF017N02+ ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
JMFF042H14+ ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
____________________________________________________________
consensus ACAATTTACTGTTTAGAGTAGTCAGGTCTCGGATTACCGAATTTGTTAAGAAATTCAAGC
. : . : . : . : . : . :
JMFS008D02+ TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
JMFF007A03+ TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
JMFF011F06+ TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
JMFF017N02+ TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
JMFF042H14+ TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
____________________________________________________________
consensus TCAAGTTATTGGGTAGCTTGTCACCTTTAAAACCTTTCTCTTTAGAGGGATAAACTTGGA
. : . : . : . : . : . :
JMFS008D02+ CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
JMFF007A03+ CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
JMFF011F06+ CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
JMFF017N02+ CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
JMFF042H14+ CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
____________________________________________________________
consensus CATTTCCTTGGCCATCCAAAGTCCCACCACCTGAGAGTGTGAAGTGATCTATGTATTTAA
. : . : . : . : . : . :
JMFS008D02+ TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
JMFF007A03+ TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
JMFF011F06+ TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
JMFF017N02+ TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
JMFF042H14+ TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
____________________________________________________________
consensus TGGTTAACCATTCCTTTTTGCCGTCCATATTTTTAGGATTAGGAGGGGCCTTCAAGATAG
. : . : . : . : . : . :
JMFS008D02+ CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
JMFF007A03+ CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
JMFF011F06+ CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
JMFF017N02+ CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
JMFF042H14+ CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
____________________________________________________________
consensus CCATGATTTTAAGCTCAATCGGGGCTTTGCATGGACCCGCAAGTTCTACTTGGGTCATAG
. : . : . : . : . : . :
JMFS008D02+ GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
JMFF007A03+ GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
JMFF011F06+ GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
JMFF017N02+ GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
JMFF042H14+ GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
____________________________________________________________
consensus GGAATGTGCCTTTTGGGATTACAACGGTGCTGGCAGTTGTGGCCGCACATCCTTCTTTCC
. : . : . : . : . : . :
JMFS008D02+ AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
JMFF007A03+ AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
JMFF011F06+ AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
JMFF017N02+ AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
JMFF042H14+ AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
____________________________________________________________
consensus AAGCTTTCAACAATGCCGGACCAACATCTACATTAGCCTTTGCAGCAACGTTGATAGTAG
. : . : . : . : . : . :
JMFS008D02+ CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
JMFF007A03+ CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
JMFF011F06+ CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
JMFF017N02+ CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
JMFF042H14+ CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
____________________________________________________________
consensus CACTCTCCCCAAAATGCGCTAGCATGAATAATATAAATGTGAAGGCACAGTAACTTATTG
. : . : . : . : . : . :
JMFS008D02+ TAGCCATCTTTAGGTTTGTTACTTAGATTTTAAT
JMFF007A03+ TAGCCATCTTTAGGTTTGTTACTTAGATTTTAATATTATTGTTTTTTCCTTTTGAT
JMFF011F06+ TAGCCATCTTTAGGTTTGTTACTTAGATTTTAATATTATTGTTTTTTCCTTTTGAT
JMFF017N02+ TAGCCATCTTTAGGTTTGTTACTTAGATTTTAATATTATTGTTTTTTCCTTTTGAT
JMFF042H14+ TAGCCATCTTTAGGTTTGTTACTTAGATTTTAATATTATTGTTTTTTCCTTTTGATGATT
____________________________________________________________
consensus TAGCCATCTTTAGGTTTGTTACTTAGATTTTAATATTATTGTTTTTTCCTTTTGATGATT