clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF041K13 | Sequence | 603 | 004101 (6) | ref|XP_010321276.1| | 1e-59 | PREDICTED: 50S ribosomal protein L9, chloroplastic isoform X3 [Solanum lycopers | 564 | 004101 (6) | emb|CDP14086.1| | 4e-32 | unnamed protein product [Coffea canephora] |
JMFF042M08 | Sequence | 655 | 004101 (6) | emb|CDP14086.1| | 1e-66 | unnamed protein product [Coffea canephora] | 599 | 004101 (6) | emb|CDP14086.1| | 1e-35 | unnamed protein product [Coffea canephora] |
JMSF014P06 | Sequence | 464 | 004101 (6) | ref|XP_006493612.1| | 4e-35 | PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X2 [Citrus sine | 726 | 004101 (6) | emb|CDP14086.1| | 7e-92 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004101============================================1174 17 -------------------------------------------------->JMFF041K13 <-----------------------------------------------rJMFF041K13 17 ------------------------------------------------------->JMFF042M08 <--------------------------------------------------rJMFF042M08 159 --------------------------------------->JMSF014P06 <-------------------------------------------------------------rJMSF014P06
The following clones don't have the opposite end in this pair.