clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010E02 | Sequence | 640 | 000589 (11) | ref|XP_009795347.1| | 2e-112 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] | |||||
JMFF027K20 | Sequence | 728 | 000589 (11) | ref|XP_009795347.1| | 1e-103 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] | |||||
JMFN030L17 | Sequence | 651 | 000589 (11) | ref|XP_009795347.1| | 6e-111 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] | |||||
JMFN035K03 | Sequence | 616 | 000589 (11) | ref|XP_011075827.1| | 2e-110 | PREDICTED: 60S ribosomal protein L13-1-like [Sesamum indicum] | |||||
JMFN036F01 | Sequence | 604 | 000589 (11) | ref|XP_011075827.1| | 9e-110 | PREDICTED: 60S ribosomal protein L13-1-like [Sesamum indicum] | |||||
JMFN044N19 | Sequence | 616 | 000589 (11) | ref|XP_009795347.1| | 1e-107 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] | |||||
JMSF005E07 | Sequence | 292 | 000589 (11) | ref|XP_007156319.1| | 5e-35 | hypothetical protein PHAVU_003G276400g [Phaseolus vulgaris] ref|XP_007156320.1| | |||||
JMSF011K09 | Sequence | 491 | 000589 (11) | ref|XP_010054042.1| | 6e-78 | PREDICTED: 60S ribosomal protein L13-2 [Eucalyptus grandis] gb|KCW78426.1| hypot | 749 | 000589 (11) | ref|XP_004146887.1| | 3e-112 | PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis sativus] ref|XP_ |
JMSF037F21 | Sequence | 652 | 000589 (11) | ref|XP_009795347.1| | 2e-112 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] | 681 | 000589 (11) | ref|XP_009795347.1| | 1e-104 | PREDICTED: 60S ribosomal protein L13-1 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000589============================================ 694 181 -------------------------------------------->JMSF011K09 <-------------------------------------------------------------------------------------------rJMSF011K09 181 ------------------------------------------------------------------->JMSF037F21 <------------------------------------------------------------------------------------rJMSF037F21
The following clones don't have the opposite end in this pair.
----------------------------------------->JMSF005E07- ---------------------------------------------------------------------------------------->JMFN035K03- ---------------------------------------------------------------------------------------->JMFN044N19- --------------------------------------------------------------------------------------------->JMFN030L17- <-------------------------------------------------------------------------------------rJMFF027K20- -------------------------------------------------------------------------------------->JMFN036F01- ------------------------------------------------------------------------------------------->JMFF010E02-