clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015E15 | Sequence | 456 | 004959 (10) | ref|XP_010279570.1| | 4e-46 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | 530 | 004959 (10) | ref|XP_010279570.1| | 7e-28 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] |
JMFF051A12 | Sequence | 559 | 004959 (10) | ref|XP_010279570.1| | 1e-45 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | 455 | 004959 (10) | ref|XP_010279570.1| | 4e-46 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] |
JMFS071H04 | Sequence | 422 | 004959 (10) | ref|XP_010279570.1| | 2e-46 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | |||||
JMSF002F11 | Sequence | 332 | 004959 (10) | ref|XP_010279570.1| | 7e-43 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | 576 | 004959 (10) | ref|XP_010279570.1| | 1e-45 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] |
JMSF006J24 | Sequence | 277 | 004959 (10) | ref|XP_010279570.1| | 4e-34 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | |||||
JMSF020I16 | Sequence | 497 | 004959 (10) | ref|XP_010279570.1| | 5e-46 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] | 451 | 004959 (10) | ref|XP_010279570.1| | 3e-46 | PREDICTED: 40S ribosomal protein S27-2-like [Nelumbo nucifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004959============================================ 489 43 ----------------------------------------------------------------->JMSF020I16 <------------------------------------------------------------------------------------------rJMSF020I16 66 ----------------------------------------------------->JMFF051A12 <--------------------------------------------------------------------------------------------rJMFF051A12 93 ------------------------------------------------------------------>JMFF015E15 <-----------------------------------------------------------------------------rJMFF015E15 172 ------------------------------------------------------------>JMSF002F11 <----------------------------------------------------------------rJMSF002F11
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------------------->JMFS071H04- -------------------------------------------------------->JMSF006J24-