clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002D22 | Sequence | 554 | 010647 (13) | ref|XP_009789786.1| | 2e-78 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | 748 | 010647 (13) | ref|XP_009778293.1| | 1e-90 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] |
JMFF003G23 | Sequence | 287 | 010647 (13) | ref|XP_009778293.1| | 7e-22 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | 718 | 010647 (13) | ref|XP_009778293.1| | 8e-91 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] |
JMFF025G19 | Sequence | 520 | 010647 (13) | ref|XP_009789786.1| | 1e-71 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | 650 | 010647 (13) | ref|XP_009778293.1| | 2e-84 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] |
JMFN036C19 | Sequence | 609 | 010647 (13) | ref|XP_009778293.1| | 4e-84 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | |||||
JMSF017A17 | Sequence | 191 | 010647 (13) | 761 | 010647 (13) | ref|XP_009778293.1| | 3e-90 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | |||
JMSF022N22 | Sequence | 661 | 010647 (13) | ref|XP_004250287.1| | 5e-62 | PREDICTED: CASP-like protein 2B1 [Solanum lycopersicum] | 627 | 010647 (13) | ref|XP_004250287.1| | 3e-62 | PREDICTED: CASP-like protein 2B1 [Solanum lycopersicum] |
JMSF032B18 | Sequence | 673 | 010647 (13) | ref|XP_009778293.1| | 6e-102 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] | 711 | 010647 (13) | ref|XP_009778293.1| | 8e-103 | PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010647============================================ 980 36 ------------------>JMSF017A17 <-----------------------------------------------------------------------------rJMSF017A17 85 ---------------------------->JMFF003G23 <------------------------------------------------------------------------rJMFF003G23 100 -------------------------------------------------------->JMFF002D22 <----------------------------------------------------------------------------rJMFF002D22 125 ---------------------------------------------------->JMFF025G19 <-----------------------------------------------------------------rJMFF025G19 202 ------------------------------------------------------------------->JMSF032B18 <------------------------------------------------------------------------rJMSF032B18 356 ------------------------------------------------------------------>JMSF022N22 <---------------------------------------------------------------rJMSF022N22
The following clones don't have the opposite end in this pair.
------------------------------------------------------------->JMFN036C19-