Contig 010647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002D22Sequence554010647 (13)ref|XP_009789786.1|2e-78PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]748010647 (13)ref|XP_009778293.1|1e-90PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]
JMFF003G23Sequence287010647 (13)ref|XP_009778293.1|7e-22PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]718010647 (13)ref|XP_009778293.1|8e-91PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]
JMFF025G19Sequence520010647 (13)ref|XP_009789786.1|1e-71PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]650010647 (13)ref|XP_009778293.1|2e-84PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]
JMFN036C19Sequence609010647 (13)ref|XP_009778293.1|4e-84PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]
JMSF017A17Sequence191010647 (13)761010647 (13)ref|XP_009778293.1|3e-90PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]
JMSF022N22Sequence661010647 (13)ref|XP_004250287.1|5e-62PREDICTED: CASP-like protein 2B1 [Solanum lycopersicum]627010647 (13)ref|XP_004250287.1|3e-62PREDICTED: CASP-like protein 2B1 [Solanum lycopersicum]
JMSF032B18Sequence673010647 (13)ref|XP_009778293.1|6e-102PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]711010647 (13)ref|XP_009778293.1|8e-103PREDICTED: CASP-like protein 2B1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF022N22+ TGTATAGGTATCCTGTTATG
                      ____________________________________________________________
consensus TGTATAGGTATCCTGTTATG
 
. : . : . : . : . : . :
rJMSF022N22- AAGATTCCACAGATCAGAATACAATTACCAAATAAAAACAACCT
JMSF022N22+ TAAATTCTTCCATTCAAAGATTCCACAGATCAGAATACAATTACCAAATAAAAACAACCT
rJMSF017A17- AAGATTCCACAGATCAGAATACAATTACCAAATAAAAACAACCT
rJMFF003G23- T
rJMFF002D22- ATCAGAATACAATTACCAAATAAAAACAACCT
                      ____________________________________________________________
consensus TAAATTCTTCCATTCAAAGATTCCACAGATCAGAATACAATTACCAAATAAAAACAACCT
 
. : . : . : . : . : . :
rJMSF022N22- AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTTCATTCTTATTTT
JMSF022N22+ AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTTCATTCTTATTTT
rJMSF017A17- AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTTCATTCTTATTTT
rJMFF025G19- ATGGATTTTCATTCTTATTTT
rJMFF003G23- AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTTCATTCTTATTTT
rJMFF002D22- AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTT--TTCTTATTTT
                      ____________________________________________________________
consensus AGTATATATGGATCATGTAATGCAACAAAGGCAAAAAACATGGATTTTCATTCTTATTTT
 
. : . : . : . : . : . :
rJMSF022N22- ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
JMSF022N22+ ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
rJMSF017A17- ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
rJMFF025G19- ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
rJMFF003G23- ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
rJMFF002D22- ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
rJMSF032B18- AAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
                      ____________________________________________________________
consensus ACAGAACCAAAGCACCCAACTAAGATTCACATACATTGAAAAGCAAGCTACCAAGTCCCA
 
. : . : . : . : . : . :
rJMSF022N22- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
JMSF022N22+ CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
rJMSF017A17- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
rJMFF025G19- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
rJMFF003G23- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
rJMFF002D22- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
rJMSF032B18- CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
JMSF032B18+ GATT
                      ____________________________________________________________
consensus CATCTTCTAGTTAAGCCACTACATATATAGTCTTTCTTCATCTTCCATTGCACTTGGATT
 
. : . : . : . : . : . :
rJMSF022N22- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
JMSF022N22+ TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
rJMSF017A17- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
rJMFF025G19- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
rJMFF003G23- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
rJMFF002D22- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
rJMSF032B18- TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
JMSF032B18+ TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
                      ____________________________________________________________
consensus TATTGTCACCGTACAAACGGAAGAGACTGAAAGCCGAGATACCACAGAGAATTATCATGC
 
. : . : . : . : . : . :
rJMSF022N22- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
JMSF022N22+ TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
rJMSF017A17- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
rJMFF025G19- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
rJMFF003G23- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
rJMFF002D22- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
rJMSF032B18- TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
JMSF032B18+ TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
JMFF002D22+ TACCGT
JMFN036C19+ CCCCGACTTGGTTGCAGAACTTACCGT
                      ____________________________________________________________
consensus TAATGCAAACAATGAGTGAACTTGCGATGCCTTCCCCGACTTGGTTGCAGAACTTACCGT
 
. : . : . : . : . : . :
rJMSF022N22- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
JMSF022N22+ ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
rJMSF017A17- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
rJMFF025G19- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
rJMFF003G23- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
rJMFF002D22- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
rJMSF032B18- ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
JMSF032B18+ ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
JMFF002D22+ ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
JMFN036C19+ ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
                      ____________________________________________________________
consensus ACATGTTACATATCCTCATCCATTGCAGTTCGGACTGCCCTATCTTCGCATACACAGCAG
 
. : . : . : . : . : . :
rJMSF022N22- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
JMSF022N22+ ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
rJMSF017A17- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
rJMFF025G19- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
rJMFF003G23- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
rJMFF002D22- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
rJMSF032B18- ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
JMSF032B18+ ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
JMFF002D22+ ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
JMFN036C19+ ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTAAGCCATCAGCTGATCACCAGAAA
JMFF025G19+ GCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
                      ____________________________________________________________
consensus ACTGTGCCGCAGCTGCTACAGCCCCCAAACTCAAGTACGCCATCAGCTGATCACCAGAAA
 
. : . : . : . : . : . :
rJMSF022N22- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
JMSF022N22+ AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
rJMSF017A17- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
rJMFF025G19- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
rJMFF003G23- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
rJMFF002D22- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
rJMSF032B18- AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
JMSF032B18+ AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
JMFF002D22+ AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
JMFN036C19+ AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
JMFF025G19+ AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
                      ____________________________________________________________
consensus AGATAGCCCAAGCCAGGGGTTTGTTGAAGAGAACACTTCCTCTAATCATACTCACTGAGC
 
. : . : . : . : . : . :
rJMSF022N22- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
JMSF022N22+ ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
rJMSF017A17- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
rJMFF025G19- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTAGCTATCACCAAAAACA
rJMFF003G23- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
rJMFF002D22- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
rJMSF032B18- ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
JMSF032B18+ ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
JMFF002D22+ ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
JMFN036C19+ ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
JMFF025G19+ ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTAGCTATCACCAAAAACA
                      ____________________________________________________________
consensus ACCTCACAAGCTGAACCAGTGAGTAGGCAGCAGCTAATCCATTGGCTATCACCAAAAACA
 
. : . : . : . : . : . :
rJMSF022N22- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAAT
JMSF022N22+ CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAAT
rJMSF017A17- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAATCT
rJMFF025G19- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
rJMFF003G23- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
rJMFF002D22- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
rJMSF032B18- CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
JMSF032B18+ CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
JMFF002D22+ CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
JMFN036C19+ CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
JMFF025G19+ CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
                      ____________________________________________________________
consensus CTAGGGCTTTCATGTCTGTAAATTTAGCTTTCTTCCGAATGGAGAAGATCTCTCTAACCT
 
. : . : . : . : . : . :
rJMSF017A17- GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
rJMFF025G19- GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
rJMFF003G23- GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
rJMFF002D22- GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
rJMSF032B18- GACTATCTATCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
JMSF032B18+ GACTATCTATCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
JMFF002D22+ GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
JMFN036C19+ GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
JMFF025G19+ GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
JMFF003G23+ TGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
                      ____________________________________________________________
consensus GACTATCTGTCCCTATAAGAACAGCACCCACAATCGCTAACCCACAAATCACACACCTAA
 
. : . : . : . : . : . :
rJMSF017A17- AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGT
rJMFF025G19- AAATCAGCTCTGCAAGTCTTACTCTCTTG
rJMFF003G23- AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGT
rJMFF002D22- AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGNTGCTGCCATGGTA
rJMSF032B18- AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
JMSF032B18+ AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
JMFF002D22+ AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
JMFN036C19+ AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
JMFF025G19+ AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
JMFF003G23+ AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGNTGCCATGGTAGA
JMSF017A17+ GCCATGGTAGA
                      ____________________________________________________________
consensus AAATCAGCTCTGCAAGTCTTACTCTCTTGTCAACCACCTTCAGGTTGCTGCCATGGTAGA
 
. : . : . : . : . : . :
rJMSF032B18- CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMSF032B18+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMFF002D22+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMFN036C19+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMFF025G19+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMFF003G23+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
JMSF017A17+ CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
                      ____________________________________________________________
consensus CTGGAACATTTCCAGGGCTCACTCCAACACCCAAGTAGCTCATGGTCACCAATATGCTCC
 
. : . : . : . : . : . :
JMSF032B18+ TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
JMFF002D22+ TCAAACCCACACCGGAAACCCCNCAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
JMFN036C19+ TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
JMFF025G19+ TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
JMFF003G23+ TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
JMSF017A17+ TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
                      ____________________________________________________________
consensus TCAAACCCACACCGGAAACCCCACAAACTAAAGAAAGCTCCTCAACCCCACAAACTATGG
 
. : . : . : . : . : . :
JMSF032B18+ CAAATGA
JMFF002D22+ CAAATGAC
JMFN036C19+ CAAATGACAAAACGAGTAAATGGGTATTAGTCCTCAGAAAAG
JMFF025G19+ CAAATGACAAAACGAGTAAATGGGTATTAGTCCTCAGAAAAGAACACACAGGAA
JMFF003G23+ CAAATGACAAAACGAGTAAATGGGTATTAGTCCTCAGAAAAGAACACACAGGAA
JMSF017A17+ CAAATGACAAAACGAGTAAATGGGTATTAGTCCTCAGAAAAGAACACACAGGAATTCTCC
                      ____________________________________________________________
consensus CAAATGACAAAACGAGTAAATGGGTATTAGTCCTCAGAAAAGAACACACAGGAATTCTCC