clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF040D23 | Sequence | 488 | 003249 (5) | ref|XP_009794863.1| | 185 | PREDICTED: uncharacterized protein LOC104241622 [Nicotiana sylvestris] | 770 | 003249 (5) | ref|XP_009776406.1| | 334 | PREDICTED: uncharacterized protein LOC104226186 [Nicotiana sylvestris] |
JMFN005O11 | Sequence | 337 | 003249 (5) | ref|XP_007029644.1| | 1e-30 | Plasma membrane isoform 4 [Theobroma cacao] gb|EOY10146.1| Plasma membrane isofo | |||||
JMSF052H07 | Sequence | 669 | 003249 (5) | ref|XP_009776406.1| | 284 | PREDICTED: uncharacterized protein LOC104226186 [Nicotiana sylvestris] | 971 | 003249 (5) | ref|XP_009776406.1| | 438 | PREDICTED: uncharacterized protein LOC104226186 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003249============================================1159 4 --------------------------------------------------------->JMSF052H07 <-----------------------------------------------------------------------------------rJMSF052H07 11 ----------------------------------------->JMFF040D23 <-----------------------------------------------------------------rJMFF040D23
The following clones don't have the opposite end in this pair.
---------------------------->JMFN005O11-