clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005I23 | Sequence | 521 | 011879 (8) | ref|XP_009587192.1| | 90.9 | PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis] | 775 | 011879 (8) | ref|XP_009796957.1| | 178 | PREDICTED: uncharacterized protein LOC104243467 [Nicotiana sylvestris] |
JMFN012K05 | Sequence | 627 | 011879 (8) | ref|XP_009587192.1| | 125 | PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis] | |||||
JMFN012M22 | Sequence | 592 | 011879 (8) | ref|XP_010319454.1| | 125 | PREDICTED: uncharacterized protein LOC101267399 [Solanum lycopersicum] | |||||
JMSF003H20 | Sequence | 395 | 011879 (8) | 757 | 011879 (8) | ref|XP_009587192.1| | 183 | PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis] | |||
JMSF050F20 | Sequence | 690 | 011879 (8) | ref|XP_009587192.1| | 114 | PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis] | 721 | 011879 (8) | ref|XP_009796957.1| | 160 | PREDICTED: uncharacterized protein LOC104243467 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011879============================================1571 68 -------------------------------->JMFF005I23 <------------------------------------------------rJMFF005I23 159 ------------------------------------------->JMSF050F20 <---------------------------------------------rJMSF050F20 224 ------------------------>JMSF003H20 <-----------------------------------------------rJMSF003H20
The following clones don't have the opposite end in this pair.
--------------------------------------->JMFN012K05- ------------------------------------->JMFN012M22-