Contig 011879:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005I23Sequence521011879 (8)ref|XP_009587192.1|90.9PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis]775011879 (8)ref|XP_009796957.1|178PREDICTED: uncharacterized protein LOC104243467 [Nicotiana sylvestris]
JMFN012K05Sequence627011879 (8)ref|XP_009587192.1|125PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis]
JMFN012M22Sequence592011879 (8)ref|XP_010319454.1|125PREDICTED: uncharacterized protein LOC101267399 [Solanum lycopersicum]
JMSF003H20Sequence395011879 (8)757011879 (8)ref|XP_009587192.1|183PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis]
JMSF050F20Sequence690011879 (8)ref|XP_009587192.1|114PREDICTED: uncharacterized protein LOC104084935 [Nicotiana tomentosiformis]721011879 (8)ref|XP_009796957.1|160PREDICTED: uncharacterized protein LOC104243467 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF005I23-                                                           TTTCATATATC
                      ____________________________________________________________
consensus                                                              TTTCATATATC
 
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JMFN012M22+                                                           AAGACTAAGCAA
rJMFF005I23-          TTTCACATAAGACTAAATATACATACATAAAAACTTGCAAATCTTTAGAAGACTAAGCAA
                      ____________________________________________________________
consensus             TTTCACATAAGACTAAATATACATACATAAAAACTTGCAAATCTTTAGAAGACTAAGCAA
 
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JMFN012M22+           GCCATTTGAATAGAAATGTTCCTAATGCATTGATAAATGTCATTACAGAAAACACAAGAC
rJMFF005I23-          GCCATTTGAATAGAAATGTTCCTAATGCATTGATAAATGTCATTACAGAAAACACAAGAC
                      ____________________________________________________________
consensus             GCCATTTGAATAGAAATGTTCCTAATGCATTGATAAATGTCATTACAGAAAACACAAGAC
 
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JMFN012M22+           TTTTAACTATATATATATAACAGACAGCAGCCCGAGGCCAGTGGTCGAGCATAGGTATCA
rJMFF005I23-          TTTTAACTATATATATATAACAGACAGCAGCCCGAGGCCAGTGGTCGAGCATAGGTATCA
rJMSF050F20-                               AGACAGCAGCCCGAGGCCAGTGGTCGAGCATAGGTATCA
                      ____________________________________________________________
consensus             TTTTAACTATATATATATAACAGACAGCAGCCCGAGGCCAGTGGTCGAGCATAGGTATCA
 
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JMFN012M22+           TTGCAAAGAGTTTATACAATTATACAAATACTGCATTTCAATATATCTTTCACATAAGAC
rJMFF005I23-          TTGCAAAGAGTTTATACAATTATACAAATACTGCATTTCAATATATCTTTCACATAAGAC
rJMSF050F20-          TTGCAAAGAGTTTATACAATTATACAAATACTGCATTTCAATATATCTTTCACATAAGAC
rJMSF003H20-                                           CATTTCAATATATCTTTCACATAAGAC
                      ____________________________________________________________
consensus             TTGCAAAGAGTTTATACAATTATACAAATACTGCATTTCAATATATCTTTCACATAAGAC
 
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JMFN012M22+           TAAATATACATACATAAAAACTGGCAAATCTTGAGAAGACTAAGCAGGCTATGTCCATTA
rJMFF005I23-          TAAATATACATACATAAAAACTGGCAAATCTTGAGAAGACTAAGCAGGCTATGTCCATTA
rJMSF050F20-          TAAATATACATACATAAAAACTGGCAAATCTTGAGAAGACTAAGCAGGCTATGTCCATTA
rJMSF003H20-          TAAATATACATACATAAAAACTGGCAAATCTTGAGAAGACTAAGCAGGCTATGTCCATTA
                      ____________________________________________________________
consensus             TAAATATACATACATAAAAACTGGCAAATCTTGAGAAGACTAAGCAGGCTATGTCCATTA
 
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JMFN012M22+           TGAAAACTACAATGCAAACTTGACACTTTTACGGAAAACATACTAACCTCGGGGGTGCTC
rJMFF005I23-          TGAAAACTACAATGCAAACTTGACACTTTTACGGAAAACATACTAACCTCGGGGGTGCTC
rJMSF050F20-          TGAAAACTACAATGCAAACTTGACACTTTTACGGAAAACATACTAACCTCGGGGGTGCTC
rJMSF003H20-          TGAAAACTACAATGCAAACTTGACACTTTTACGGAAAACATACTAACCTCGGGGGTGCTC
                      ____________________________________________________________
consensus             TGAAAACTACAATGCAAACTTGACACTTTTACGGAAAACATACTAACCTCGGGGGTGCTC
 
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JMFN012M22+           TCGTTAACCTCAGACAACATAAACAACATGAGGAACCTTCTCCTTGTCAAAAGGCAAGCT
rJMFF005I23-          TCGTTAACCTCAGACAACATAAACA--ATGAGGAACCTTCTCCTTGTCAAAAGGCAAGCT
rJMSF050F20-          TCGTTAACCTCAGACAACATAAACAACATGAGGAACCTTCTCCTTGTCAAAAGGCAAGCT
rJMSF003H20-          TCGTTAACCTCAGACAACATAAACAACATGAGGAACCTTCTCCTTGTCAAAAGGCAAGCT
                      ____________________________________________________________
consensus             TCGTTAACCTCAGACAACATAAACAACATGAGGAACCTTCTCCTTGTCAAAAGGCAAGCT
 
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JMFN012M22+           CACATAGTCCTGTGCAAACTCCTCTGCAATCTCGAATGCAAGCTCCCCGTGCAATGCCTT
rJMFF005I23-          CACATAGTCCTGTGCAAACTCCTCTGCAATCTCGAATGCAAGCTCCCCGTGCAATGCCTT
rJMSF050F20-          CACATAGTCCTGTGCAAACTCCTCTGCAATCTCGAATGCAAGCTCCCCGTGCAATGCCTT
rJMSF003H20-          CACATAGTCCTGTGCAAACTCCTCTGCAATCTCGAATGCAAGCTCCCCGTGCAATGCCTT
                      ____________________________________________________________
consensus             CACATAGTCCTGTGCAAACTCCTCTGCAATCTCGAATGCAAGCTCCCCGTGCAATGCCTT
 
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JMFN012M22+           GCAGTACATATACAGCACCACACCCGCAGCAACGCTCTGAAGCAACAGTACAGTCGCGAA
rJMFF005I23-          GCAGTACATATACAGCACCACACCCGCAGCAACGCTCTGAAGCAACAGTACAGTCGCGAA
rJMSF050F20-          GCAGTACATATACAGCACCACACCCGCAGCAACGCTCTGAAGCAACAGTACAGTCGCGAA
rJMSF003H20-          GCAGTACATATACAGCACCACACCCGCAGCAACGCTCTGAAGCAACAGTACAGTCGCGAA
                      ____________________________________________________________
consensus             GCAGTACATATACAGCACCACACCCGCAGCAACGCTCTGAAGCAACAGTACAGTCGCGAA
 
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JMFN012M22+           ACCCGAGCTGATCACCATCTGCAATATGACTGCCCAGCTCCACCACCCACCAGCCACGCC
rJMFF005I23-          ACCCGAGCTGATCACCATCTGCAATATGACTGCCCAGCTCCACCACCCACCAGCCACGCC
rJMSF050F20-          ACCCGAGCTGATCACCATCTGCAATATGACTGCCCAGCTCCACCACCCACCAGCCACGCC
rJMSF003H20-          ACCCGAGCTGATCACCATCTGCAATATGACTGCCCAGCTCCACCACCCACCAGCCACGCC
                      ____________________________________________________________
consensus             ACCCGAGCTGATCACCATCTGCAATATGACTGCCCAGCTCCACCACCCACCAGCCACGCC
 
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JMFN012M22+           TACATGGAGCAAGAAGGTGGAGCAACCGCCCACCAGGCAG                    
rJMFF005I23-          TACATGGAGCAAGAAGGTGGAGCAACCGCCCACCAGGCAGCCAATCAAAAGGCTGAAAAA
rJMSF050F20-          TACATGGAGCAAGAAGGTGGAGCAACCGCCCACCAGGCAGCCAATCAAAAGGCTGAAAAA
rJMSF003H20-          TACATGGAGCAAGAAGGTGGAGCAACCGCCCACCAGGCAGCCAATCAAAAGGCTGAAAAA
                      ____________________________________________________________
consensus             TACATGGAGCAAGAAGGTGGAGCAACCGCCCACCAGGCAGCCAATCAAAAGGCTGAAAAA
 
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rJMFF005I23-          CAGCAATATTGACAATGCTACCCCTCTCATCCCCTTCACCAATTCAGCACTTCTCCTCAA
rJMSF050F20-          CAGCAATATTGACAATGCTACCCCTCTCATCCCCTTCACCAATTCAGCACTTCTCCTCAG
rJMSF003H20-          CAGCAATATTGACAATGCTACCCCTCTCATCCCCTTCACCAATTCAGCGCTTCTCCTCAA
                      ____________________________________________________________
consensus             CAGCAATATTGACAATGCTACCCCTCTCATCCCCTTCACCAATTCAGCACTTCTCCTCAA
 
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rJMFF005I23-          GGGCCCATACCCCCATCTCGACTCAACCACCACAACCACGGGCGCC              
rJMSF050F20-          GGGCCCATACCCCCATCTCGACTCAACCACCACAACCACGGGCGCCAACACCCAGTTAAC
rJMSF003H20-          GGGCCCATACCCCCATCTCGACTCAACCACCACAACCACGGGCGCCAACACCCAGTTAAC
                      ____________________________________________________________
consensus             GGGCCCATACCCCCATCTCGACTCAACCACCACAACCACGGGCGCCAACACCCAGTTAAC
 
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rJMSF050F20-          CTGCACCCACAGCATCACAAGCCCGACCACCACCGCAAAGATNATCGCCAGAACCATGAA
rJMSF003H20-          CTGCACCCACAGCATCACAAGCCCGACCACCACCGCAAAGATAATCGCCAGAACCATGAA
                      ____________________________________________________________
consensus             CTGCACCCACAGCATCACAAGCCCGACCACCACCGCAAAGATAATCGCCAGAACCATGAA
 
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rJMSF050F20-          GTAAACCGAGTCGTAATCCACC                                      
rJMSF003H20-          GTAAACCGAGTCGTAATCCACCTCAACTCCCACCATATCAAGCCCTTTCAACAATAGGCC
JMFN012K05+                 CGAGTCGTAATCCACCTCAACTCCCACCATATCAAGCCCTTTCAACAATAGGCC
JMSF050F20+                                   AACTCCCACCATATCAAGCCCTTTCAACAATAGGCC
                      ____________________________________________________________
consensus             GTAAACCGAGTCGTAATCCACCTCAACTCCCACCATATCAAGCCCTTTCAACAATAGGCC
 
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rJMSF003H20-          CGCAGAGAGCCCGAAAGCCATAGCAATTAAACAAAGGAGGACTTTTGCGACTACCACAGT
JMFN012K05+           CGCAGAGAGCCCGAAAGCCATAGCAATTAAACAAAGGAGGACTTTTGCGACTACCACAGT
JMSF050F20+           CGCAGAGAGCCCGAAAGCCATAGCAATTAAACAAAGGAGGACTTTTGCGACTACCACAGT
                      ____________________________________________________________
consensus             CGCAGAGAGCCCGAAAGCCATAGCAATTAAACAAAGGAGGACTTTTGCGACTACCACAGT
 
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rJMSF003H20-          CGCA                                                        
JMFN012K05+           CGCAACCATGGGCAAGAAAGAGTACAATACCGACTTGAAAGACGAAACCAGCTTCACGGG
JMFF005I23+                       CAAGAAAGAGTACAATACCGACTTGAAAGACGAAACCAGCTTCACGGG
JMSF050F20+           CGCAACCATGGGCAAGAAAGAGTACAATACCGACTTGAAAGACGAAACCAGCTTCACGGG
                      ____________________________________________________________
consensus             CGCAACCATGGGCAAGAAAGAGTACAATACCGACTTGAAAGACGAAACCAGCTTCACGGG
 
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JMFN012K05+           TCTGCCATAGAACCCATGGAAGGTGCTGTAGGAGATCGTGGACACCCCAAACAGGCTAGC
JMFF005I23+           TCTGCCATAGAACCCATGGAAGGTGCTGTAGGAGATCGTGGACACCCCAAACAGGCTAGC
JMSF050F20+           TCTGCCATAGAACCCATGGAAGGTGCTGTAGGAGATCGTGGACACCCCAAACAGGCTAGC
                      ____________________________________________________________
consensus             TCTGCCATAGAACCCATGGAAGGTGCTGTAGGAGATCGTGGACACCCCAAACAGGCTAGC
 
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JMFN012K05+           CAGGAACACAAACAGACCATACACGAGATGAAACACGAAGAATTTCAAATCCCCCTCATC
JMFF005I23+           CAGGAACACAAACAGACCATACACGAGATGAAACACGAAGAATTTCAAATCCCCCTCATC
JMSF050F20+           CAGGAACACAAACAGACCATACACGAGATGAAACACGAAGAATTTCAAATCCCCCTCATC
                      ____________________________________________________________
consensus             CAGGAACACAAACAGACCATACACGAGATGAAACACGAAGAATTTCAAATCCCCCTCATC
 
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JMFN012K05+           ATCATCATCATCCGGCAGGGTCGGGTCGAACCGGATAAACCTGCTGGTGTAGAAGATGAT
JMFF005I23+           ATCATCATCATCCGGCAGGGTCGGGTCGAACCGGATAAACCTGCTGGTGTAGAAGATGAT
JMSF050F20+           ATCATCATCATCCGGCAGGGTCGGGTCGAACCGGATAAACCTGCTGGTGTAGAAGATGAT
JMSF003H20+                                    TCGAACCGGATAAACCTGCTGGTGTAGAAGATGAT
                      ____________________________________________________________
consensus             ATCATCATCATCCGGCAGGGTCGGGTCGAACCGGATAAACCTGCTGGTGTAGAAGATGAT
 
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JMFN012K05+           AGGGTTTGGGTGAGAGAACGCGGCGTGGAGAGTAGGGAAGATGATCAGCGAGAAGGATAA
JMFF005I23+           AGGGTTTGGGTGAGAGAACGCGGCGTGGAGAGTAGGGAAGATGATCAGCGAGAAGGATAA
JMSF050F20+           AGGGTTTGGGTGAGAGAACGCGGCGTGGAGAGTAGGGAAGATGATCAGCGAGAAGGATAA
JMSF003H20+           AGGGTTTGGGTGAGAGAACGCGGCGTGGAGAGTAGGGAAGATGATCAGCGAGAAGGATAA
                      ____________________________________________________________
consensus             AGGGTTTGGGTGAGAGAACGCGGCGTGGAGAGTAGGGAAGATGATCAGCGAGAAGGATAA
 
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JMFN012K05+           GGGCAAGAGAAAGAAAACAGAGAGCGCTAAGAAATGGCGGGAGTGGGCGTTGATTATGCG
JMFF005I23+           GGGCAAGAGAAAGAAAACAGAGAGCGCTAAGAAATGGCGGGAGTGGGCGTTGATTATGCG
JMSF050F20+           GGGCAAGAGAAAGAAAACAGAGAGCGCTAAGAAATGGCGGGAGTGGGCGTTGATTATGCG
JMSF003H20+           GGGCAAGAGAAAGAAAACAGAGAGCGCTAAGAAATGGCGGGAGTGGGCGTTGATTATGCG
                      ____________________________________________________________
consensus             GGGCAAGAGAAAGAAAACAGAGAGCGCTAAGAAATGGCGGGAGTGGGCGTTGATTATGCG
 
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JMFN012K05+           CTTCGATTCAGATAGGACTCCACAGAAAGTGAGGGAGTGTGAATAGGGAAGAGCAGACAT
JMFF005I23+           CTTCGATTCAGATAGGACTCCACAGAAAGTGAGGGAGTGTGAATAGGGAAGAGCAGACAT
JMSF050F20+           CTTCGATTCAGATAGGACTCCACAGAAAGTGAGGGAGTGTGAATAGGGAAGAGCAGACAT
JMSF003H20+           CTTCGATTCAGATAGGACTCCACAGAAAGTGAGGGAGTGTGAATAGGGAAGAGCAGACAT
                      ____________________________________________________________
consensus             CTTCGATTCAGATAGGACTCCACAGAAAGTGAGGGAGTGTGAATAGGGAAGAGCAGACAT
 
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JMFN012K05+           GGATGATGATGATGATGAATCACAAGTGCGCAAGACGATTACTGAGTATAGATGATTGGA
JMFF005I23+           GGATGATGATGATGATGAATCACAAGTGCGCAAGACGATTACTGAGTATAGATGATTGGA
JMSF050F20+           GGATGATGATGATGATGAATCACAAGTGCGCAAGACGATTACTGAGTATAGATGATTGGA
JMSF003H20+           GGATGATGATGATGATGAATCACAAGTGCGCAAGACGATTACTGAGTATAGATGATTGGA
                      ____________________________________________________________
consensus             GGATGATGATGATGATGAATCACAAGTGCGCAAGACGATTACTGAGTATAGATGATTGGA
 
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JMFN012K05+           TGATGATCCCAGGAAGAGAGAGAGAGGGATTGT                           
JMFF005I23+           TGATGATCCCAGGAAGAGAGAGAGAGGGATTGTTTGTGAAAGATGGATGTCTG       
JMSF050F20+           TGATGATCCCAGGAAGAGAGAGAGAGGGATTGTTTGTGAAAGATGGATGTCTGGGTTTGG
JMSF003H20+           TGATGATCCCAGGAAGAGAGAGAGAGGGATTGTTTGTGAAAGATGGATGTCTGGGTTTGG
                      ____________________________________________________________
consensus             TGATGATCCCAGGAAGAGAGAGAGAGGGATTGTTTGTGAAAGATGGATGTCTGGGTTTGG
 
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JMSF050F20+           TTAGGGTTTGAATTCGGGTTTAATCCGACAGGTTTGGCAGAATTTTCTTGAAG       
JMSF003H20+           TTAGGGTTTGAATTCGGGTTTAATCCGACAGGTTTGGCAGAATTTTCTTGAAGAAGACCC
                      ____________________________________________________________
consensus             TTAGGGTTTGAATTCGGGTTTAATCCGACAGGTTTGGCAGAATTTTCTTGAAGAAGACCC