clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005A11 | Sequence | 512 | 013584 (8) | ref|NP_001169011.1| | 3e-59 | uncharacterized LOC100382843 [Zea mays] gb|ACN31032.1| unknown [Zea mays] tpg|DA | 762 | 013584 (8) | ref|XP_004253089.1| | 2e-68 | PREDICTED: PHD finger protein ALFIN-LIKE 4 [Solanum lycopersicum] |
JMFF005P04 | Sequence | 447 | 013584 (8) | ref|NP_001169011.1| | 2e-44 | uncharacterized LOC100382843 [Zea mays] gb|ACN31032.1| unknown [Zea mays] tpg|DA | 730 | 013584 (8) | ref|XP_004253089.1| | 2e-58 | PREDICTED: PHD finger protein ALFIN-LIKE 4 [Solanum lycopersicum] |
JMFF010A11 | Sequence | 563 | 013584 (8) | ref|XP_004253089.1| | 3e-29 | PREDICTED: PHD finger protein ALFIN-LIKE 4 [Solanum lycopersicum] | |||||
JMFF030A20 | Sequence | 512 | 013584 (8) | gb|ABK25484.1| | 3e-75 | unknown [Picea sitchensis] | 525 | 013584 (8) | ref|XP_004253089.1| | 2e-27 | PREDICTED: PHD finger protein ALFIN-LIKE 4 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013584============================================1237 47 ----------------------------------->JMFF005P04 <---------------------------------------------------------rJMFF005P04 47 ---------------------------------------->JMFF005A11 <---------------------------------------------------------rJMFF005A11 76 ---------------------------------------->JMFF030A20 <-----------------------------------------rJMFF030A20
The following clones don't have the opposite end in this pair.
------------------------------------------------------>JMSF052B07* <--------------------------------------------rJMFF010A11-