clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP002A01 | Sequence | 498 | 001518 (10) | ref|XP_002311516.1| | 1e-19 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP004A03 | Sequence | 507 | 001518 (10) | ref|XP_002311516.1| | 5e-19 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP004B05 | Sequence | 383 | 001518 (10) | ref|XP_002311516.1| | 6e-13 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP004G03 | Sequence | 507 | 001518 (10) | ref|XP_002311516.1| | 1e-19 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP004H04 | Sequence | 509 | 001518 (10) | ref|XP_002311516.1| | 1e-19 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP007F04 | Sequence | 506 | 001518 (10) | ref|XP_002311516.1| | 1e-19 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP007G04 | Sequence | 508 | 001518 (10) | ref|XP_002311516.1| | 2e-18 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP017E11 | Sequence | 506 | 001518 (10) | ref|XP_002311516.1| | 2e-18 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP017G07 | Sequence | 506 | 001518 (10) | ref|XP_002311516.1| | 9e-20 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob | |||||
JMCP017G12 | Sequence | 506 | 001518 (10) | ref|XP_002311516.1| | 9e-20 | high-mobility-group family protein [Populus trichocarpa] gb|EEE88883.1| high-mob |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001518============================================ 509
The following clones don't have the opposite end in this pair.
<--------------------------------------------------------------------------------------------------rJMCP004A03- <--------------------------------------------------------------------------------------------------rJMCP017G12- <--------------------------------------------------------------------------------------------------rJMCP007F04- <---------------------------------------------------------------------------------------------------rJMCP004H04- <-------------------------------------------------------------------------------------------------rJMCP002A01- <--------------------------------------------------------------------------------------------------JMCP007G04- <--------------------------------------------------------------------------------------------------rJMCP017G07- <--------------------------------------------------------------------------------------------------rJMCP004G03- <--------------------------------------------------------------------------------------------------rJMCP017E11- <--------------------------------------------------------------------------rJMCP004B05-