List of clones in pair P011079.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K23Sequence190001838 (28)emb|CDP19007.1|1e-10unnamed protein product [Coffea canephora]688001838 (28)ref|XP_009626274.1|2e-135PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento
JMFF015P20Sequence529001838 (28)emb|CDP19007.1|8e-79unnamed protein product [Coffea canephora]228001838 (28)
JMFF035D15Sequence560001838 (28)emb|CDX98158.1|2e-54BnaC07g09400D [Brassica napus]708001838 (28)gb|AEW70716.1|360light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys edulis]
JMFF036A14Sequence528001838 (28)emb|CDP19007.1|1e-97unnamed protein product [Coffea canephora]774001838 (28)ref|XP_011100602.1|8e-156PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF036G18Sequence560001838 (28)emb|CDP19007.1|3e-106unnamed protein product [Coffea canephora]341001838 (28)gb|ABW07803.1|4e-50chlorophyll A-B binding protein [Solenostemon scutellarioides]
JMFF042O15Sequence650001838 (28)emb|CDP19007.1|2e-128unnamed protein product [Coffea canephora]595001838 (28)ref|XP_011100602.1|2e-107PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF046E04Sequence555001838 (28)emb|CDP19007.1|7e-106unnamed protein product [Coffea canephora]509001838 (28)ref|XP_011100602.1|8e-85PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF046K23Sequence575001838 (28)emb|CDP19007.1|7e-111unnamed protein product [Coffea canephora]495001838 (28)ref|XP_011100602.1|7e-85PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFF051D13Sequence581001838 (28)emb|CDP19007.1|4e-107unnamed protein product [Coffea canephora]583001838 (28)ref|XP_011100602.1|8e-90PREDICTED: chlorophyll a-b binding protein 5, chloroplastic [Sesamum indicum]
JMFN002A01Sequence564001838 (28)emb|CDP19007.1|9e-111unnamed protein product [Coffea canephora]
JMFN006M01Sequence627001838 (28)emb|CDP19007.1|3e-128unnamed protein product [Coffea canephora]
JMFN011A04Sequence472001838 (28)gb|AHI85722.1|8e-77stress-induced protein 17, partial [Capsicum annuum]
JMFN011G23Sequence511001838 (28)emb|CDP19007.1|2e-95unnamed protein product [Coffea canephora]
JMFN030D13Sequence508001838 (28)emb|CDP19007.1|8e-79unnamed protein product [Coffea canephora]
JMFN034B24Sequence566001838 (28)emb|CDP19007.1|1e-113unnamed protein product [Coffea canephora]
JMFN042A10Sequence634001838 (28)ref|XP_009626274.1|6e-145PREDICTED: chlorophyll a-b binding protein 36, chloroplastic [Nicotiana tomento
JMFN046F23Sequence581001838 (28)emb|CDP19007.1|3e-117unnamed protein product [Coffea canephora]
JMFS109B10Sequence627001838 (28)ref|NP_001050586.1|3e-134Os03g0592500 [Oryza sativa Japonica Group] sp|Q10HD0.1|CB23_ORYSJ RecName: Full=
JMFS110A09Sequence627001838 (28)emb|CDP19007.1|3e-128unnamed protein product [Coffea canephora]

Contig 1838 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001838============================================1174         
  54      -------------------------------------------->JMFF015P20                                                     
                                                                                        <----------------rJMFF015P20  
 197      ----------------------------------------------->JMFF051D13                                                  
                                                <--------------------------------------------rJMFF051D13  
 202      ---------------------------------------------->JMFF046E04                                                   
                                                  <------------------------------------------rJMFF046E04  
 202      ------------------------------------------------------>JMFF042O15                                           
                                          <--------------------------------------------------rJMFF042O15  
 208      ----------------------------------------------->JMFF035D15                                                  
                               <-----------------------------------------------------------rJMFF035D15  
 210      --------------->JMFF003K23                                                                                  
                                 <----------------------------------------------------------rJMFF003K23  
 210      -------------------------------------------->JMFF036A14                                                     
                           <----------------------------------------------------------------rJMFF036A14  
 213      ------------------------------------------------>JMFF046K23                                                 
                                                  <-----------------------------------------rJMFF046K23  
 445      ----------------------------------------------->JMFF036G18                                                  
                                            <---------------------------rJMFF036G18

The following clones don't have the opposite end in this pair.

                                  ---------------------------------------------------->JMFS109B10-                    
            ------------------------------------------------->JMFN046F23-                                             
            ---------------------------------------------------->JMFN006M01-                                          
           ------------------------------------------>JMFN011G23-                                                     
            ---------------------------------------------------->JMFS110A09-                                          
                                                     --------------------------------------->JMFN011A04-              
                              ----------------------------------------------------->JMFN042A10-                       
           ----------------------------------------------->JMFN002A01-                                                
     ------------------------------------------>JMFN030D13-                                                           
            ----------------------------------------------->JMFN034B24-